RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ARFGEF1Q9Y6D6 1849 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 SEC14L2O76054 403 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 MPEG1Q2M385 716 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 WDR53Q7Z5U6 358 aaPredicted RBP14.82□□□□□ -0.04
PTPN13-204ENST00000436978 ATOH8Q96SQ7 321 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 WDR83Q9BRX9 315 aaKnown RBP14.82□□□□□ -0.04
PTPN13-204ENST00000436978 CACNG6Q9BXT2 260 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 THSD1Q9NS62 852 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 EBF1Q9UH73 591 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 HHLA2Q9UM44 414 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 ABLIM3O94929 683 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 CXCR4P61073 352 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 HTRA3P83110 453 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 LTB4RQ15722 352 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 OR1S1Q8NH92 325 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 ZFAND1Q8TCF1 268 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 ARL6Q9H0F7 186 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 VAPAQ9P0L0 249 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 P2RX6O15547 441 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 RACK1P63244 317 aaKnown RBP14.82□□□□□ -0.04
PTPN13-204ENST00000436978 C17orf67Q0P5P2 114 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 BCL7AQ4VC05 210 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 ASRGL1Q7L266 308 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 OPRD1P41143 372 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 FXYD4P59646 89 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 VASNQ6EMK4 673 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 SLC46A1Q96NT5 459 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 INSM2Q96T92 566 aaPredicted RBP14.82□□□□□ -0.04
PTPN13-204ENST00000436978 MICU1Q9BPX6 476 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 CUEDC1Q9NWM3 386 aaPredicted RBP14.82□□□□□ -0.04
PTPN13-204ENST00000436978 MPIG6BO95866 241 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 ZNF616Q08AN1 781 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 GPR18Q14330 331 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 SLC35F3Q8IY50 421 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 ST6GALNAC5Q9BVH7 336 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 LHX6Q9UPM6 363 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 SERPINE2P07093 398 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 PSMB5P28074 263 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 SLC36A2Q495M3 483 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 TMEM52BQ4KMG9 183 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 TMEM178AQ8NBL3 297 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 DYNLRB1Q9NP97 96 aa14.82□□□□□ -0.04
PTPN13-204ENST00000436978 TRAV27A0A087WT01 109 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 FUOMA2VDF0 154 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 FAM171A2A8MVW0 826 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 MITFO75030 526 aaPredicted RBP14.81□□□□□ -0.04
PTPN13-204ENST00000436978 F11P03951 625 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 ACP2P11117 423 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 ETV4P43268 484 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 HBA1P69905 142 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 PRR18Q8N4B5 295 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 HYLS1Q96M11 299 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 PIGQQ9BRB3 760 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 OR52D1Q9H346 318 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 C1GALT1Q9NS00 363 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 UBR3Q6ZT12 1888 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 KIAA1024LP59773 190 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 MGAT3Q09327 533 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 PGGHGQ32M88 737 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 PODNL1Q6PEZ8 512 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 LSM14AQ8ND56 463 aaKnown RBP14.81□□□□□ -0.04
PTPN13-204ENST00000436978 OR11L1Q8NGX0 322 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 ARRDC2Q8TBH0 407 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 OBP2BQ9NPH6 170 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 MARCH5Q9NX47 278 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 ENPP5Q9UJA9 477 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 CACNG2Q9Y698 323 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 TMEM212A6NML5 194 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 H7C2Y5 167 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 OR51L1Q8NGJ5 315 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 HINT2Q9BX68 163 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 ULBP2Q9BZM5 246 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 FAM230AA0A1W2PPH8 454 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 GABRR1P24046 479 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 MCOLN1Q9GZU1 580 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 MRPL15Q9P015 296 aaKnown RBP14.81□□□□□ -0.04
PTPN13-204ENST00000436978 OTOL1A6NHN0 477 aaPredicted RBP14.81□□□□□ -0.04
PTPN13-204ENST00000436978 IFNA4P05014 189 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 MAOAP21397 527 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 CST9Q5W186 159 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 KIR3DX1Q9H7L2 352 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 FAM53CQ9NYF3 392 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 CCL26Q9Y258 94 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 ALDH3B2P48448 385 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 CNIH2Q6PI25 160 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 TMEFF1Q8IYR6 380 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 ATOH1Q92858 354 aaPredicted RBP14.81□□□□□ -0.04
PTPN13-204ENST00000436978 SLAMF7Q9NQ25 335 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 MOKQ9UQ07 419 aa14.81□□□□□ -0.04
PTPN13-204ENST00000436978 SHOXO15266 292 aa14.8□□□□□ -0.04
PTPN13-204ENST00000436978 CFAP77Q6ZQR2 320 aa14.8□□□□□ -0.04
PTPN13-204ENST00000436978 CBLL1Q75N03 491 aa14.8□□□□□ -0.04
PTPN13-204ENST00000436978 VRK2Q86Y07 508 aa14.8□□□□□ -0.04
PTPN13-204ENST00000436978 CYB561A3Q8NBI2 242 aa14.8□□□□□ -0.04
PTPN13-204ENST00000436978 LINC01553A4QN01 128 aa14.8□□□□□ -0.04
PTPN13-204ENST00000436978 PRDX3P30048 256 aaKnown RBP14.8□□□□□ -0.04
PTPN13-204ENST00000436978 ACTBL2Q562R1 376 aa14.8□□□□□ -0.04
PTPN13-204ENST00000436978 OR4K15Q8NH41 348 aa14.8□□□□□ -0.04
PTPN13-204ENST00000436978 AP1S3Q96PC3 154 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms