RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 HNRNPA1P09651 372 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC00839-202ENST00000429940 EPXP11678 715 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 ZNF3P17036 446 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 ENPP1P22413 925 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 SLC2A5P22732 501 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 NDUFS1P28331 727 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 DRD3P35462 400 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 RAG2P55895 527 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 ACTC1P68032 377 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 ACTA1P68133 377 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 SNTB2Q13425 540 aaKnown RBP13.89□□□□□ -0.19
LINC00839-202ENST00000429940 EXOSC2Q13868 293 aaKnown RBP13.89□□□□□ -0.19
LINC00839-202ENST00000429940 SLC22A10Q63ZE4 541 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 GPR139Q6DWJ6 353 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 FAAH2Q6GMR7 532 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 MTFR2Q6P444 385 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 TMPRSS11FQ6ZWK6 438 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 SSX6Q7RTT6 188 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 FGD2Q7Z6J4 655 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 OR51Q1Q8NH59 317 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 HAVCR2Q8TDQ0 301 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 CCDC120Q96HB5 630 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 SPRTNQ9H040 489 aaPredicted RBP13.89□□□□□ -0.19
LINC00839-202ENST00000429940 DLL4Q9NR61 685 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 ST6GALNAC2Q9UJ37 374 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 MOSPD1Q9UJG1 213 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 NUP50Q9UKX7 468 aa13.89□□□□□ -0.19
LINC00839-202ENST00000429940 TRABD2BA6NFA1 517 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 ZNF593O00488 134 aaPredicted RBP13.88□□□□□ -0.19
LINC00839-202ENST00000429940 FLRT2O43155 660 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 HYAL3O43820 417 aaPredicted RBP13.88□□□□□ -0.19
LINC00839-202ENST00000429940 SERPINA3P01011 423 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 WNT1P04628 370 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 DBIP07108 87 aaKnown RBP13.88□□□□□ -0.19
LINC00839-202ENST00000429940 LAMP2P13473 410 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 UGT2B7P16662 529 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 CAPZA2P47755 286 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 TNFRSF17Q02223 184 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 PRSS45Q7RTY3 260 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 COMMD7Q86VX2 200 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 ZNF619Q8N2I2 560 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 OR4K14Q8NGD5 310 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 OR51A7Q8NH64 312 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 OR56B4Q8NH76 319 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 THAP4Q8WY91 577 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 PEX11GQ96HA9 241 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 TIMM29Q9BSF4 260 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 ZNF350Q9GZX5 532 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 PRO3102Q9H379 93 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 BEX1Q9HBH7 125 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 SCP2D1Q9UJQ7 156 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 CAMK2AQ9UQM7 478 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 MED31Q9Y3C7 131 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 MDC1Q14676 2089 aaKnown RBP13.88□□□□□ -0.19
LINC00839-202ENST00000429940 SNRNP200O75643 2136 aaKnown RBP13.88□□□□□ -0.19
LINC00839-202ENST00000429940 TRPM6Q9BX84 2022 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 NPIPA5A0A0B4J1W7 369 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 NPIPA7E9PJI5 369 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 PEX12O00623 359 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 STX11O75558 287 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 SCO1O75880 301 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 PPP1R3DO95685 299 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 PAK4O96013 591 aaPredicted RBP13.88□□□□□ -0.19
LINC00839-202ENST00000429940 NPIPA8P0DM63 369 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 NID1P14543 1247 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 KLF9Q13886 244 aaPredicted RBP13.88□□□□□ -0.19
LINC00839-202ENST00000429940 RPE65Q16518 533 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 ZSWIM7Q19AV6 140 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 AMZ1Q400G9 498 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 TP53I3Q53FA7 332 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 ZNF425Q6IV72 752 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 BAIAP2L2Q6UXY1 529 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 CMIPQ8IY22 773 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 RFLNBQ8N5W9 214 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 SPERTQ8NA61 448 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 DOK4Q8TEW6 326 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 PCNPQ8WW12 178 aaKnown RBP13.88□□□□□ -0.19
LINC00839-202ENST00000429940 GAL3ST3Q96A11 431 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 ACTR6Q9GZN1 396 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 TTYH1Q9H313 450 aaPredicted RBP13.88□□□□□ -0.19
LINC00839-202ENST00000429940 PHPT1Q9NRX4 125 aaPredicted RBP13.88□□□□□ -0.19
LINC00839-202ENST00000429940 UBQLN2Q9UHD9 624 aa13.88□□□□□ -0.19
LINC00839-202ENST00000429940 TBC1D3EA0A087X179 549 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 CIB4A0PJX0 185 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 SCAMP1O15126 338 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 MID1O15344 667 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 GSTZ1O43708 216 aaPredicted RBP13.87□□□□□ -0.19
LINC00839-202ENST00000429940 ARL6IP5O75915 188 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 MPC2O95563 127 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 DRD5P21918 477 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 SNRPNP63162 240 aaKnown RBP13.87□□□□□ -0.19
LINC00839-202ENST00000429940 SIM1P81133 766 aaPredicted RBP13.87□□□□□ -0.19
LINC00839-202ENST00000429940 SUZ12Q15022 739 aaKnown RBP13.87□□□□□ -0.19
LINC00839-202ENST00000429940 CLLU1Q5K131 121 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 DCST2Q5T1A1 773 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 RTL10Q7L3V2 364 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 IZUMO1Q8IYV9 350 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 CEP76Q8TAP6 659 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 ARSGQ96EG1 525 aa13.87□□□□□ -0.19
LINC00839-202ENST00000429940 ORAI3Q9BRQ5 295 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms