RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PPP1R2P41236 205 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 GDI2P50395 445 aaKnown RBP3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 CCL11P51671 97 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 ARHGDIBP52566 201 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 NDST2P52849 883 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 RPS15P62841 145 aaKnown RBP3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 POLR2LP62875 67 aaKnown RBP3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 ARF5P84085 180 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 GNA12Q03113 381 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 ACY1Q03154 408 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 PAX8Q06710 450 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 SCRN3Q0VDG4 424 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 NME3Q13232 169 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 IL11RAQ14626 422 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 MEA1Q16626 185 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 MAJINQ3KP22 176 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 SYT14P1Q58G82 188 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 ATP1A1-AS1Q5TC04 95 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 NKAIN2Q5VXU1 208 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 ITPRIPL1Q6GPH6 555 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 CTRB2Q6GPI1 263 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 TMEM211Q6ICI0 200 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 PPP1R2P3Q6NXS1 205 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 ZYG11AQ6WRX3 759 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 TMPRSS11BQ86T26 416 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 SLC51BQ86UW2 128 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 DEFB106AQ8N104 65 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 LSMEM1Q8N8F7 131 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 KIAA0895Q8NCT3 520 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 IPMKQ8NFU5 416 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 ATL1Q8WXF7 558 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 HAUS1Q96CS2 278 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 VPS39Q96JC1 886 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 LURAP1Q96LR2 239 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 MS4A10Q96PG2 267 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 NDNQ99608 321 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 BARD1Q99728 777 aaKnown RBP3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 NKX3-1Q99801 234 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 CTRCQ99895 268 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 CHCHD6Q9BRQ6 235 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 WRAP53Q9BUR4 548 aaKnown RBP3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 ULBP3Q9BZM4 244 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 SHCBP1LQ9BZQ2 653 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 TM6SF2Q9BZW4 377 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 ING2Q9H160 280 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 GOLPH3LQ9H4A5 285 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 OPA3Q9H6K4 179 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 Q9N2K0 584 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 CHST11Q9NPF2 352 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 POLE3Q9NRF9 147 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 PRR34Q9NV39 138 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 RMND1Q9NWS8 449 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 TEX10Q9NXF1 929 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 NKIRAS2Q9NYR9 191 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 COX16Q9P0S2 106 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 C5AR2Q9P296 337 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 TRIM10Q9UDY6 481 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 TP53TG3Q9ULZ0 132 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 WBP11Q9Y2W2 641 aaKnown RBP3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 MFHAS1Q9Y4C4 1052 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 MRPS18BQ9Y676 258 aaKnown RBP3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 SPG11Q96JI7 2443 aa3.94□□□□□ -1.78
HMGB3P5-201ENST00000428894 DCHS2Q6V1P9 2916 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 IGLV3-10A0A075B6K4 115 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 C1orf232A0A0U1RR37 186 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 A0A1W2PPR1 153 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 MAGEB16A2A368 324 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 A8MU76 341 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 TOX3O15405 576 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 LRRTM2O43300 516 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 RIPK2O43353 540 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 GMNNO75496 209 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 ZMPSTE24O75844 475 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 IGSF6O95976 241 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 PCCBP05166 539 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 HEXBP07686 556 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 GSTT2P0CG29 244 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 GSTT2BP0CG30 244 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 CD1EP15812 388 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 CASP1P29466 404 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 HSPA13P48723 471 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 S100A12P80511 92 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 MRPS25P82663 173 aaKnown RBP3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 ACTN3Q08043 901 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 ASPHQ12797 758 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 ART3Q13508 389 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 SPCS2Q15005 226 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 MOGQ16653 247 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 CA9Q16790 459 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 HSP90AA4PQ58FG1 418 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 SLC35D3Q5M8T2 416 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 IL23RQ5VWK5 629 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 C11orf63Q6NUN7 778 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 TTC23LQ6PF05 361 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 C1orf122Q6ZSJ8 110 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 SZRD1Q7Z422 152 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 BNIPLQ7Z465 357 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 SYVN1Q86TM6 617 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 LINC00612Q8N6U2 182 aa3.93□□□□□ -1.78
HMGB3P5-201ENST00000428894 AVL9Q8NBF6 648 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms