RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.92□□□□□ -0.022e-7■■■■■ 35.1
C9orf3-206ENST00000428313 A0A087WUU8 490 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 TMEM272A0A1B0GTI8 110 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 MBLAC1A4D2B0 266 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 ACOT7O00154 380 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 OAZ2O95190 189 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 CH25HO95992 272 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 CD8AP01732 235 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 ALPPL2P10696 532 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 AHRP35869 848 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 PMELP40967 661 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 ACTR1BP42025 376 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 PRSS53Q2L4Q9 553 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 DMKNQ6E0U4 476 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 TMEM71Q6P5X7 295 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 C11orf88Q6PI97 169 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 TMEM99Q8N816 258 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 BOLLQ8N9W6 283 aaKnown RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 CHST14Q8NCH0 376 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 STK35Q8TDR2 534 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 TNFAIP8L1Q8WVP5 186 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 NMRK2Q9NPI5 230 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 HINT3Q9NQE9 182 aaKnown RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 WBP1LQ9NX94 342 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 LRFN2Q9ULH4 789 aa14.92□□□□□ -0.02
C9orf3-206ENST00000428313 KIF26AQ9ULI4 1882 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-206ENST00000428313 A0A1B0GWJ7 208 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 GLTPD2A6NH11 291 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 MEIS3P2A8K0S8 358 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 E9PI62 339 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 M0QZQ0 153 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 VEGFDO43915 354 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 ACTL6AO96019 429 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 SLC25A4P12235 298 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 GNSP15586 552 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 DCTDP32321 178 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 P2RX1P51575 399 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 RPS26P62854 115 aaKnown RBP14.91□□□□□ -0.02
C9orf3-206ENST00000428313 C9orf152Q5JTZ5 239 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 GAREM2Q75VX8 874 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 COMTD1Q86VU5 262 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 GCDHQ92947 438 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-206ENST00000428313 CPNE4Q96A23 557 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-206ENST00000428313 RAB7BQ96AH8 199 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 ZNF75AQ96N20 296 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 ZDHHC5Q9C0B5 715 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 TXNRD2Q9NNW7 524 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 TMEM138Q9NPI0 162 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 ZDHHC3Q9NYG2 299 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 SPG21Q9NZD8 308 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 TNFSF18Q9UNG2 199 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 C9orf170A2RU37 121 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 H3BNC9 293 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 FMO6PO60774 539 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 LILRB5O75023 590 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 TBX18O95935 607 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 PTH2RP49190 550 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 CSNK1EP49674 416 aaKnown RBP14.91□□□□□ -0.02
C9orf3-206ENST00000428313 CNTN1Q12860 1018 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 GLT8D1Q68CQ7 371 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 KRT77Q7Z794 578 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 ZNF467Q7Z7K2 595 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-206ENST00000428313 CPOQ8IVL8 374 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 CBARPQ8N350 705 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-206ENST00000428313 SLC43A2Q8N370 569 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 C17orf47Q8NEP4 570 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 WNT2BQ93097 391 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 CAMK1GQ96NX5 476 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 PAAF1Q9BRP4 392 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 ZNF471Q9BX82 626 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-206ENST00000428313 UQCC1Q9NVA1 299 aa14.91□□□□□ -0.02
C9orf3-206ENST00000428313 OR6C76A6NM76 312 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 HMGN4O00479 90 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 SFTPCP11686 197 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 CD79AP11912 226 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 NT5EP21589 574 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 NFYBP25208 207 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 PPT1P50897 306 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 TAS2R50P59544 299 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 MRPL58Q14197 206 aaKnown RBP14.9□□□□□ -0.02
C9orf3-206ENST00000428313 RPL13AP3Q6NVV1 102 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 FAAP20Q6NZ36 180 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 NIPAL3Q6P499 406 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 FAM111BQ6SJ93 734 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 IL34Q6ZMJ4 242 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 MEPCEQ7L2J0 689 aaKnown RBP14.9□□□□□ -0.02
C9orf3-206ENST00000428313 SSX9Q7RTT3 188 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 GJD3Q8N144 294 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 KLHDC9Q8NEP7 349 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 PIGXQ8TBF5 258 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 SLC25A38Q96DW6 304 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 PRM3Q9NNZ6 103 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 SEMA4GQ9NTN9 838 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 A0A1B0GV90 55 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 POM121BA6NF01 834 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 SLC31A2O15432 143 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 F12P00748 615 aaPredicted RBP14.9□□□□□ -0.02
C9orf3-206ENST00000428313 MMP3P08254 477 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 UCHL1P09936 223 aa14.9□□□□□ -0.02
C9orf3-206ENST00000428313 LAP3P28838 519 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms