RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 EBF4Q9BQW3 602 aa18.45■□□□□ 0.54
HSPG2-205ENST00000427897 TACO1Q9BSH4 297 aaKnown RBP18.45■□□□□ 0.54
HSPG2-205ENST00000427897 LIME1Q9H400 295 aa18.45■□□□□ 0.54
HSPG2-205ENST00000427897 ARMC7Q9H6L4 198 aa18.45■□□□□ 0.54
HSPG2-205ENST00000427897 CTPS2Q9NRF8 586 aa18.45■□□□□ 0.54
HSPG2-205ENST00000427897 SLC6A13Q9NSD5 602 aa18.45■□□□□ 0.54
HSPG2-205ENST00000427897 CCM2LQ9NUG4 571 aaPredicted RBP18.45■□□□□ 0.54
HSPG2-205ENST00000427897 KLHL9Q9P2J3 617 aa18.45■□□□□ 0.54
HSPG2-205ENST00000427897 PLEKHA6Q9Y2H5 1048 aa18.45■□□□□ 0.54
HSPG2-205ENST00000427897 CLIC1O00299 241 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 NR5A2O00482 541 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 EDF1O60869 148 aaKnown RBP18.44■□□□□ 0.54
HSPG2-205ENST00000427897 DNAJA2O60884 412 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 YES1P07947 543 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 NCF2P19878 526 aaPredicted RBP18.44■□□□□ 0.54
HSPG2-205ENST00000427897 FKBP2P26885 142 aaKnown RBP18.44■□□□□ 0.54
HSPG2-205ENST00000427897 HTR3AP46098 478 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 RASGEF1BQ0VAM2 473 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 LARS2Q15031 903 aaKnown RBP18.44■□□□□ 0.54
HSPG2-205ENST00000427897 SYT14P1Q58G82 188 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 AP1ARQ63HQ0 302 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 TUSC5Q8IXB3 177 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 OR52P1PQ8NH57 321 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 AURKBQ96GD4 344 aaPredicted RBP18.44■□□□□ 0.54
HSPG2-205ENST00000427897 C6orf203Q9P0P8 240 aaPredicted RBP18.44■□□□□ 0.54
HSPG2-205ENST00000427897 KLHL13Q9P2N7 655 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 CHRNA9Q9UGM1 479 aa18.44■□□□□ 0.54
HSPG2-205ENST00000427897 C5orf58C9J3I9 102 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 NID1P14543 1247 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 PPP3CBP16298 524 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 DIO1P49895 249 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 IRX1P78414 480 aaPredicted RBP18.43■□□□□ 0.54
HSPG2-205ENST00000427897 GTDC1Q4AE62 458 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 LIN52Q52LA3 116 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 AGKQ53H12 422 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 ZNF440Q8IYI8 595 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 FAM71CQ8NEG0 241 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 GTF2H4Q92759 462 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 ZNF524Q96C55 264 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 SPDL1Q96EA4 605 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 PIK3IP1Q96FE7 263 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 THOC1Q96FV9 657 aaKnown RBP18.43■□□□□ 0.54
HSPG2-205ENST00000427897 SIKE1Q9BRV8 207 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 RABEP2Q9H5N1 569 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 COQ10BQ9H8M1 238 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 GP6Q9HCN6 339 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 PCDHB14Q9Y5E9 798 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 MPDZO75970 2070 aa18.43■□□□□ 0.54
HSPG2-205ENST00000427897 TACC2O95359 2948 aa18.42■□□□□ 0.54
HSPG2-205ENST00000427897 CFAP73A6NFT4 308 aa18.42■□□□□ 0.54
HSPG2-205ENST00000427897 ETV2O00321 342 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-205ENST00000427897 HRGP04196 525 aa18.42■□□□□ 0.54
HSPG2-205ENST00000427897 COPZ1P61923 177 aa18.42■□□□□ 0.54
HSPG2-205ENST00000427897 MRPL2Q5T653 305 aaKnown RBP18.42■□□□□ 0.54
HSPG2-205ENST00000427897 TMPPEQ6ZT21 453 aa18.42■□□□□ 0.54
HSPG2-205ENST00000427897 VRK2Q86Y07 508 aa18.42■□□□□ 0.54
HSPG2-205ENST00000427897 DDIT4LQ96D03 193 aa18.42■□□□□ 0.54
HSPG2-205ENST00000427897 PAIP1Q9H074 479 aaKnown RBP18.42■□□□□ 0.54
HSPG2-205ENST00000427897 TRIM33Q9UPN9 1127 aa18.42■□□□□ 0.54
HSPG2-205ENST00000427897 HEATR5AQ86XA9 2040 aa18.42■□□□□ 0.54
HSPG2-205ENST00000427897 A0A096LPI6 279 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 A0A0G2JPF8 293 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 HNRNPCL2B2RXH8 293 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 HNRNPCL3B7ZW38 293 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 AP3D1O14617 1153 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 HNRNPCL1O60812 293 aaKnown RBP18.41■□□□□ 0.54
HSPG2-205ENST00000427897 BCAS1O75363 584 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-205ENST00000427897 RAF1P04049 648 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 FESP07332 822 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 VIMP08670 466 aaKnown RBP18.41■□□□□ 0.54
HSPG2-205ENST00000427897 TFPTP0C1Z6 253 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 HNRNPCL4P0DMR1 293 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 PPIBP23284 216 aaKnown RBP18.41■□□□□ 0.54
HSPG2-205ENST00000427897 CLK1P49759 484 aaKnown RBP18.41■□□□□ 0.54
HSPG2-205ENST00000427897 POLR2HP52434 150 aaKnown RBP18.41■□□□□ 0.54
HSPG2-205ENST00000427897 OR2B6P58173 313 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 SQLEQ14534 574 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 RGNQ15493 299 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 ZSWIM7Q19AV6 140 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 ALKBH2Q6NS38 261 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 BLOC1S3Q6QNY0 202 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 NUFIP2Q7Z417 695 aaKnown RBP18.41■□□□□ 0.54
HSPG2-205ENST00000427897 SLC38A5Q8WUX1 472 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 DNAJA3Q96EY1 480 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 CCDC106Q9BWC9 280 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 HDHD5Q9BXW7 423 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 GPR52Q9Y2T5 361 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 IFT52Q9Y366 437 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 HDGFL3Q9Y3E1 203 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 MYO9AB2RTY4 2548 aa18.41■□□□□ 0.54
HSPG2-205ENST00000427897 CSMD2Q7Z408 3487 aa18.4■□□□□ 0.54
HSPG2-205ENST00000427897 TMED7-TICAM2A0A0A6YYA0 188 aa18.4■□□□□ 0.54
HSPG2-205ENST00000427897 TROVE2P10155 538 aaKnown RBP eCLIP18.4■□□□□ 0.54
HSPG2-205ENST00000427897 CRYGSP22914 178 aa18.4■□□□□ 0.54
HSPG2-205ENST00000427897 CXCR1P25024 350 aa18.4■□□□□ 0.54
HSPG2-205ENST00000427897 MRPL19P49406 292 aaKnown RBP18.4■□□□□ 0.54
HSPG2-205ENST00000427897 RPS26P11Q5JNZ5 115 aaPredicted RBP18.4■□□□□ 0.54
HSPG2-205ENST00000427897 STAC2Q6ZMT1 411 aa18.4■□□□□ 0.54
HSPG2-205ENST00000427897 CADM2Q8N3J6 435 aa18.4■□□□□ 0.54
HSPG2-205ENST00000427897 ZNF775Q96BV0 537 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms