RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 GAS1P54826 345 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 NRG3P56975 720 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 SF3A2Q15428 464 aaKnown RBP24.23■■□□□ 1.47
LDB1-202ENST00000425280 FAM198BQ6UWH4 519 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 THAP3Q8WTV1 239 aaPredicted RBP24.23■■□□□ 1.47
LDB1-202ENST00000425280 MR1Q95460 341 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 LGALS12Q96DT0 336 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 SGTBQ96EQ0 304 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 CCNL2Q96S94 520 aaPredicted RBP24.23■■□□□ 1.47
LDB1-202ENST00000425280 MRPS18AQ9NVS2 196 aaKnown RBP24.23■■□□□ 1.47
LDB1-202ENST00000425280 NXT1Q9UKK6 140 aaKnown RBP24.23■■□□□ 1.47
LDB1-202ENST00000425280 NPFFR2Q9Y5X5 522 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 KIF26BQ2KJY2 2108 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 OR6C70A6NIJ9 312 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 SNTNA6NMZ2 147 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 C17orf51A8MQB3 221 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 FADS1O60427 444 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 SPCS2Q15005 226 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 RNFT2Q96EX2 444 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 IFT27Q9BW83 186 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 MCCC2Q9HCC0 563 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 CLEC2DQ9UHP7 191 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 IGKV1D-42A0A075B6H8 117 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 B4E171 279 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 HCRTR2O43614 444 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 ZNF354AO60765 605 aaPredicted RBP24.22■■□□□ 1.47
LDB1-202ENST00000425280 PNMTP11086 282 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 TSPAN7P41732 249 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 SLC26A5P58743 744 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 KLHL22Q53GT1 634 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 RNLSQ5VYX0 342 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 DIMT1Q9UNQ2 313 aaKnown RBP24.22■■□□□ 1.47
LDB1-202ENST00000425280 RALGAPA1Q6GYQ0 2036 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 TMEM200CA6NKL6 621 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 ELOA3DA6NLF2 546 aaPredicted RBP24.22■■□□□ 1.47
LDB1-202ENST00000425280 ZNF182P17025 639 aaPredicted RBP24.22■■□□□ 1.47
LDB1-202ENST00000425280 EVI2BP34910 448 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 SLC6A8P48029 635 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 DOC2BQ14184 412 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 ELOA3BQ3SY89 546 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 ELOA3Q8NG57 546 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 CMKLR1Q99788 373 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 SLC19A3Q9BZV2 496 aa24.22■■□□□ 1.47
LDB1-202ENST00000425280 HINT3Q9NQE9 182 aaKnown RBP24.22■■□□□ 1.47
LDB1-202ENST00000425280 TEX51A0A1B0GUA7 166 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 EIF4E2O60573 245 aaKnown RBP24.21■■□□□ 1.47
LDB1-202ENST00000425280 PPM1BO75688 479 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 RAB36O95755 333 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 MTNR1AP48039 350 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 CDH11P55287 796 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 MED22Q15528 200 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 TMEM44Q2T9K0 475 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 ARMCX4Q5H9R4 360 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 SLC35F1Q5T1Q4 408 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 BBS1Q8NFJ9 593 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 OR8K3Q8NH51 312 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 ERGIC3Q9Y282 383 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 LSM2Q9Y333 95 aaKnown RBP24.21■■□□□ 1.47
LDB1-202ENST00000425280 TTC28Q96AY4 2481 aa24.21■■□□□ 1.47
LDB1-202ENST00000425280 GALR2O43603 387 aaPredicted RBP24.2■■□□□ 1.47
LDB1-202ENST00000425280 SCO2O43819 266 aa24.2■■□□□ 1.47
LDB1-202ENST00000425280 RAB40BQ12829 278 aa24.2■■□□□ 1.47
LDB1-202ENST00000425280 CCDC157Q569K6 752 aa24.2■■□□□ 1.47
LDB1-202ENST00000425280 RTL4Q6ZR62 310 aa24.2■■□□□ 1.47
LDB1-202ENST00000425280 SLC46A3Q7Z3Q1 461 aa24.2■■□□□ 1.47
LDB1-202ENST00000425280 CPOQ8IVL8 374 aa24.2■■□□□ 1.47
LDB1-202ENST00000425280 ZNF563Q8TA94 476 aa24.2■■□□□ 1.47
LDB1-202ENST00000425280 RFKQ969G6 155 aa24.2■■□□□ 1.47
LDB1-202ENST00000425280 LRRN3E7EW58 273 aa24.2■■□□□ 1.46
LDB1-202ENST00000425280 WWP2O00308 870 aa24.2■■□□□ 1.46
LDB1-202ENST00000425280 GMFGO60234 142 aa24.2■■□□□ 1.46
LDB1-202ENST00000425280 HSMCR30P0CW71 290 aa24.2■■□□□ 1.46
LDB1-202ENST00000425280 ENDOUP21128 410 aaKnown RBP24.2■■□□□ 1.46
LDB1-202ENST00000425280 SLC1A3P43003 542 aa24.2■■□□□ 1.46
LDB1-202ENST00000425280 FOXK2Q01167 660 aa24.2■■□□□ 1.46
LDB1-202ENST00000425280 NXNL2Q5VZ03 156 aa24.2■■□□□ 1.46
LDB1-202ENST00000425280 ZNF517Q6ZMY9 492 aaPredicted RBP24.2■■□□□ 1.46
LDB1-202ENST00000425280 CXXC5Q7LFL8 322 aaKnown RBP24.2■■□□□ 1.46
LDB1-202ENST00000425280 NAXDQ8IW45 347 aa24.2■■□□□ 1.46
LDB1-202ENST00000425280 LRRC17Q8N6Y2 441 aa24.2■■□□□ 1.46
LDB1-202ENST00000425280 FGF20Q9NP95 211 aaPredicted RBP24.2■■□□□ 1.46
LDB1-202ENST00000425280 APOL3O95236 402 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 NADKO95544 446 aaPredicted RBP24.19■■□□□ 1.46
LDB1-202ENST00000425280 LSM3P62310 102 aaKnown RBP24.19■■□□□ 1.46
LDB1-202ENST00000425280 ROR2Q01974 943 aaKnown RBP24.19■■□□□ 1.46
LDB1-202ENST00000425280 EFR3AQ14156 821 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 NANOGP1Q8N7R0 232 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 GALNT6Q8NCL4 622 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 OR5L2Q8NGL0 311 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 RPL3LQ92901 407 aaKnown RBP24.19■■□□□ 1.46
LDB1-202ENST00000425280 DEPDC7Q96QD5 511 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 TMEM43Q9BTV4 400 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 TAPBPLQ9BX59 468 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 ADAM19Q9H013 955 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 CMC2Q9NRP2 79 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 AKAP7Q9P0M2 348 aaPredicted RBP24.19■■□□□ 1.46
LDB1-202ENST00000425280 EXPH5Q8NEV8 1989 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 IRGMA1A4Y4 181 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 FAM86C2PA6NEL3 165 aa24.19■■□□□ 1.46
LDB1-202ENST00000425280 FAM183AA6NL82 134 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms