RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 CASP12Q6UXS9 341 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 KBTBD8Q8NFY9 601 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 THAP3Q8WTV1 239 aaPredicted RBP13.78□□□□□ -0.2
CALD1-206ENST00000424922 ANKRD19PQ9H560 264 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 RAB40ALP0C0E4 278 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 RGS6P49758 472 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 GABREP78334 506 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 HOXC5Q00444 222 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.78□□□□□ -0.2
CALD1-206ENST00000424922 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.78□□□□□ -0.2
CALD1-206ENST00000424922 EIPR1Q53HC9 387 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 ZNF441Q8N8Z8 693 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 NLGN4YQ8NFZ3 816 aaPredicted RBP13.78□□□□□ -0.2
CALD1-206ENST00000424922 OR4K5Q8NGD3 323 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 OR4C3Q8NH37 302 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 PRR14Q9BWN1 585 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 MMP27Q9H306 513 aa13.78□□□□□ -0.2
CALD1-206ENST00000424922 FARSAQ9Y285 508 aaKnown RBP13.78□□□□□ -0.2
CALD1-206ENST00000424922 IGHV1-45A0A0A0MS14 117 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 ENTPD6O75354 484 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 IL33O95760 270 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 MMP11P24347 488 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 ATP12AP54707 1039 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 RGS8P57771 180 aaPredicted RBP13.77□□□□□ -0.21
CALD1-206ENST00000424922 RPS15P62841 145 aaKnown RBP13.77□□□□□ -0.21
CALD1-206ENST00000424922 TIMM50Q3ZCQ8 353 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 KIRREL2Q6UWL6 708 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 C16orf47Q6ZP98 133 aaPredicted RBP13.77□□□□□ -0.21
CALD1-206ENST00000424922 CENPSQ8N2Z9 138 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 FAM26EQ8N5C1 309 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 DIO2Q92813 273 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 ABTB1Q969K4 478 aaPredicted RBP13.77□□□□□ -0.21
CALD1-206ENST00000424922 ADOQ96SZ5 270 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 POLDIP3Q9BY77 421 aaKnown RBP13.77□□□□□ -0.21
CALD1-206ENST00000424922 NXF2Q9GZY0 626 aaKnown RBP13.77□□□□□ -0.21
CALD1-206ENST00000424922 CTPS2Q9NRF8 586 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 FLRT3Q9NZU0 649 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 CCDC59Q9P031 241 aaKnown RBP13.77□□□□□ -0.21
CALD1-206ENST00000424922 MRTO4Q9UKD2 239 aaKnown RBP13.77□□□□□ -0.21
CALD1-206ENST00000424922 RPL36Q9Y3U8 105 aaKnown RBP13.77□□□□□ -0.21
CALD1-206ENST00000424922 DOCK10Q96BY6 2186 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 PCNX3Q9H6A9 2034 aa13.77□□□□□ -0.21
CALD1-206ENST00000424922 CDHR4A6H8M9 788 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 METTL15A6NJ78 407 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 NPIPB9F8W1W9 429 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 H3BN98 237 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 TO15178 435 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 MAGEB3O15480 346 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 TPST2O60704 377 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 REM1O75628 298 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 COX6A1P12074 109 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 ABCD3P28288 659 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 IFNGR2P38484 337 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 PSMD4P55036 377 aaKnown RBP13.76□□□□□ -0.21
CALD1-206ENST00000424922 ZNF141Q15928 474 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 BTBD16Q32M84 506 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 ZER1Q7Z7L7 766 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 MINDY2Q8NBR6 621 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 C17orf47Q8NEP4 570 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 ZNF700Q9H0M5 742 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 ARMC7Q9H6L4 198 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 EML6Q6ZMW3 1958 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 STMND1H3BQB6 276 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 KPNA4O00629 521 aaPredicted RBP13.76□□□□□ -0.21
CALD1-206ENST00000424922 SOX14O95416 240 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 IGHEP01854 428 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 GKN3PP0CG01 181 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 BMP4P12644 408 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 IL12BP29460 328 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 OTX2P32243 289 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 DLSTP36957 453 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 STAT5AP42229 794 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 PLCXD2Q0VAA5 305 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 ITGADQ13349 1161 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 DESI1Q6ICB0 168 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 TUBA3EQ6PEY2 450 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 OR11G2Q8NGC1 345 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 MCFD2Q8NI22 146 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 NUBPLQ8TB37 319 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 OMA1Q96E52 524 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 IL4I1Q96RQ9 567 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 MGLLQ99685 303 aa13.76□□□□□ -0.21
CALD1-206ENST00000424922 WWP2O00308 870 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 SOCS6O14544 535 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 SLC30A4O14863 429 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 RAD1O60671 282 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 OCM2P0CE71 109 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 OCMP0CE72 109 aaPredicted RBP13.75□□□□□ -0.21
CALD1-206ENST00000424922 GSTT2P0CG29 244 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 GSTT2BP0CG30 244 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 F8A1P23610 371 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 CDK5Q00535 292 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 DNASE1L3Q13609 305 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 TRAM2Q15035 370 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 ZNF404Q494X3 552 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 ZNF362Q5T0B9 420 aaPredicted RBP13.75□□□□□ -0.21
CALD1-206ENST00000424922 SLC34A3Q8N130 599 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 GNPDA2Q8TDQ7 276 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 ADAMTS14Q8WXS8 1223 aa13.75□□□□□ -0.21
CALD1-206ENST00000424922 TP53INP1Q96A56 240 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms