RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 DNAJB12Q9NXW2 375 aaKnown RBP9.81□□□□□ -0.84
USP49-204ENST00000423567 SLC25A37Q9NYZ2 338 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 VAPAQ9P0L0 249 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 SLAMF8Q9P0V8 285 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 DSPPQ9NZW4 1301 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 EFNA2O43921 213 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 THBS1P07996 1170 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 TFPIP10646 304 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 CD8BP10966 210 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 BMP2P12643 396 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 HOXB9P17482 250 aaPredicted RBP9.8□□□□□ -0.84
USP49-204ENST00000423567 SHC1P29353 583 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 MDH1P40925 334 aaKnown RBP9.8□□□□□ -0.84
USP49-204ENST00000423567 KIR2DL2P43627 348 aaPredicted RBP9.8□□□□□ -0.84
USP49-204ENST00000423567 IDH2P48735 452 aaKnown RBP9.8□□□□□ -0.84
USP49-204ENST00000423567 CSNK2A1P68400 391 aaPredicted RBP9.8□□□□□ -0.84
USP49-204ENST00000423567 SNTB1Q13884 538 aaKnown RBP9.8□□□□□ -0.84
USP49-204ENST00000423567 NFYCQ13952 458 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 RNPS1Q15287 305 aaKnown RBP9.8□□□□□ -0.84
USP49-204ENST00000423567 MAPRE2Q15555 327 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 MAPK11Q15759 364 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 ZNF239Q16600 458 aaKnown RBP9.8□□□□□ -0.84
USP49-204ENST00000423567 SYT14P1Q58G82 188 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 ZNF311Q5JNZ3 666 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 RPS26P11Q5JNZ5 115 aaPredicted RBP9.8□□□□□ -0.84
USP49-204ENST00000423567 TMEM201Q5SNT2 666 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 VWA1Q6PCB0 445 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 ZNF836Q6ZNA1 936 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 FCRLAQ7L513 359 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 ZNF550Q7Z398 422 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 STK32CQ86UX6 486 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 TMEM200AQ86VY9 491 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 VRK2Q86Y07 508 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 MSRB3Q8IXL7 192 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 ZZZ3Q8IYH5 903 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 DPP10Q8N608 796 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 OR6K3Q8NGY3 331 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 FAM222BQ8WU58 562 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 MAL2Q969L2 176 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 STARD4Q96DR4 205 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 ZHX1-C8orf76Q96EF9 292 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 OR5B2Q96R09 309 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 SPATA5L1Q9BVQ7 753 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 ZNF385DQ9H6B1 395 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 CCDC134Q9H6E4 229 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 BCL2L10Q9HD36 194 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 GALNT8Q9NY28 637 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 CHRNA9Q9UGM1 479 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 PRDM4Q9UKN5 801 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 ZNF443Q9Y2A4 671 aaPredicted RBP9.8□□□□□ -0.84
USP49-204ENST00000423567 GMEB1Q9Y692 573 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 NOTCH2Q04721 2471 aa9.8□□□□□ -0.84
USP49-204ENST00000423567 ARHGAP21Q5T5U3 1957 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 A0A1W2PNR3 127 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 CDHR4A6H8M9 788 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 A8MXE2 369 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 SULT2B1O00204 365 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 FAAHO00519 579 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 SS18L1O75177 396 aaPredicted RBP9.79□□□□□ -0.84
USP49-204ENST00000423567 BCAS1O75363 584 aaPredicted RBP9.79□□□□□ -0.84
USP49-204ENST00000423567 PRKD3O94806 890 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 ARAFP10398 606 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 ETS2P15036 469 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 ENPP1P22413 925 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 SLC6A2P23975 617 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 SLC1A3P43003 542 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 CLK1P49759 484 aaKnown RBP9.79□□□□□ -0.84
USP49-204ENST00000423567 POLR2HP52434 150 aaKnown RBP9.79□□□□□ -0.84
USP49-204ENST00000423567 MAP2K6P52564 334 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 RAC3P60763 192 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 CDK6Q00534 326 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 SF3A3Q12874 501 aaKnown RBP eCLIP9.79□□□□□ -0.84
USP49-204ENST00000423567 EPS8Q12929 822 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 CYP51A1Q16850 503 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 MMEL1Q495T6 779 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 RUNDC3AQ59EK9 446 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 RNF220Q5VTB9 566 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 REEP3Q6NUK4 255 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 BTLAQ7Z6A9 289 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 SLC43A2Q8N370 569 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 ROBO4Q8WZ75 1007 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 DDIT4LQ96D03 193 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 LURAP1Q96LR2 239 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 ZNF607Q96SK3 696 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 CGREF1Q99674 301 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 TACO1Q9BSH4 297 aaKnown RBP9.79□□□□□ -0.84
USP49-204ENST00000423567 CCDC106Q9BWC9 280 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 SPATA9Q9BWV2 254 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 OPN3Q9H1Y3 402 aaPredicted RBP9.79□□□□□ -0.84
USP49-204ENST00000423567 COQ10BQ9H8M1 238 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 CTPS2Q9NRF8 586 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 ELOVL5Q9NYP7 299 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 CRIM1Q9NZV1 1036 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 KLHL14Q9P2G3 628 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 NDRG3Q9UGV2 375 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 SLC13A4Q9UKG4 626 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 CLEC4AQ9UMR7 237 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 ANGPT4Q9Y264 503 aa9.79□□□□□ -0.84
USP49-204ENST00000423567 TRBV5-3A0A0A0MS03 114 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 TMED7-TICAM2A0A0A6YYA0 188 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms