RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 UBFD1O14562 309 aaKnown RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 AZIN1O14977 448 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 DOK2O60496 412 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 SH3BGRLO75368 114 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 EEDO75530 441 aaKnown RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 CRCPO75575 148 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 SNRNP200O75643 2136 aaKnown RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 TIPRLO75663 272 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 CDC123O75794 336 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 MYO1DO94832 1006 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 SOX30O94993 753 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ZWINTO95229 277 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ETHE1O95571 254 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 GPR75O95800 540 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 KLK1P06870 262 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 FAM58BPP0C7Q3 252 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 UROSP10746 265 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 EFNA3P52797 238 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 NUDT6P53370 316 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 LTBQ06643 244 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ACSM2AQ08AH3 577 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 STX4Q12846 297 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 MFAP5Q13361 173 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 PCLAFQ15004 111 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 CCNYL2Q5T2Q4 361 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 AGBL2Q5U5Z8 902 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ACSM2BQ68CK6 577 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 KLHL24Q6TFL4 600 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 CYP20A1Q6UW02 462 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 IGFL2Q6UWQ7 119 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 RNF165Q6ZSG1 346 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 LANCL3Q6ZV70 420 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 GPAT4Q86UL3 456 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 NOXA1Q86UR1 476 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 KIRREL3Q8IZU9 778 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF843Q8N446 348 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 RNF175Q8N4F7 328 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ZADH2Q8N4Q0 377 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 TEX45Q8NA69 505 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 MORN4Q8NDC4 146 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 NFAM1Q8NET5 270 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 FDCSPQ8NFU4 85 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 FAM76AQ8TAV0 307 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 PSMF1Q92530 271 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 HAS2Q92819 552 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 DAZLQ92904 295 aaKnown RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 TSLPQ969D9 159 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ERGIC1Q969X5 290 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ANKRD9Q96BM1 317 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 INTS12Q96CB8 462 aaKnown RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 RBM18Q96H35 190 aaKnown RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 TXNDC15Q96J42 360 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF354BQ96LW1 612 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 CCT7Q99832 543 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 NUDT9Q9BW91 350 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 FAIM2Q9BWQ8 316 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF717Q9BY31 904 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 SHCBP1LQ9BZQ2 653 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 CENPHQ9H3R5 247 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 RPF2Q9H7B2 306 aaKnown RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 VIPAS39Q9H9C1 493 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 KCNK13Q9HB14 408 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 SCPEP1Q9HB40 452 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 MMP25Q9NPA2 562 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ADAP2Q9NPF8 381 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF71Q9NQZ8 489 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 FARSBQ9NSD9 589 aaKnown RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 STMN3Q9NZ72 180 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 TEKT2Q9UIF3 430 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 FBXW2Q9UKT8 454 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 PSME2Q9UL46 239 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 TP53TG5Q9Y2B4 290 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 CARD8Q9Y2G2 431 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 ATG4BQ9Y4P1 393 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 TIMM22Q9Y584 194 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 LYVE1Q9Y5Y7 322 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 CAPN7Q9Y6W3 813 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 USP24Q9UPU5 2620 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 DCHS1Q96JQ0 3298 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 IGHV3-20A0A0C4DH32 117 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 C1orf226A1L170 272 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 DYTNA2CJ06 578 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 SAGE2PA6NJ88 616 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 LIPT2A6NK58 231 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 A8MUA0 341 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 TMEM114B3SHH9 223 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 K7EM74 188 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 PAGE4O60829 102 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 RSL1D1O76021 490 aaKnown RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 RGS11O94810 467 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 IFNA16P05015 189 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 SERPINE1P05121 402 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 SPARCP09486 303 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 SLC35E2P0CK97 266 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 NEFHP12036 1026 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 H2AFXP16104 143 aaPredicted RBP2.27□□□□□ -2.05
VPS13A-208ENST00000423463 TNNI3P19429 210 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 MAOAP21397 527 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 PIK3R1P27986 724 aa2.27□□□□□ -2.05
VPS13A-208ENST00000423463 C21orf33P30042 268 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms