RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 HNRNPH1P31943 449 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 PIGAP37287 484 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 SLC1A2P43004 574 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 MAGEA3P43357 314 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 RGS4P49798 205 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 ZNF41P51814 821 aaPredicted RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 RPS13P62277 151 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 BTN3A2P78410 334 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 IGLV3-21P80748 117 aaPredicted RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 MRPS34P82930 218 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 CCZ1BP86790 482 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 CCZ1P86791 482 aaPredicted RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 COL10A1Q03692 680 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 DHX34Q14147 1143 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 CAPRIN1Q14444 709 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 PPP1R3AQ16821 1122 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 TOR1AIP1Q5JTV8 583 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 C9orf152Q5JTZ5 239 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 RAD9BQ6WBX8 426 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 KLHDC8AQ8IYD2 350 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 PM20D2Q8IYS1 436 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 DND1Q8IYX4 353 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 RASGEF1CQ8N431 466 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 PARP16Q8N5Y8 322 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 TEX45Q8NA69 505 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 OR5L2Q8NGL0 311 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 OR14A16Q8NHC5 309 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 LINC01560Q8TB33 94 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 ZNF721Q8TF20 911 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 ATL1Q8WXF7 558 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 DAZLQ92904 295 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 PIGTQ969N2 578 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 PYCR2Q96C36 320 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 TMCO6Q96DC7 493 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 MSI2Q96DH6 328 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 MS4A6EQ96DS6 147 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 PDLIM5Q96HC4 596 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 MARK4Q96L34 752 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 DGAT2Q96PD7 388 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 PAFAH2Q99487 392 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 AIF1LQ9BQI0 150 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 RHBGQ9H310 441 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 NT5DC2Q9H857 520 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 CALHM2Q9HA72 323 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 PSD3Q9NYI0 1048 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 CNIH4Q9P003 139 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 KLHL13Q9P2N7 655 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 FETUBQ9UGM5 382 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 TRMT6Q9UJA5 497 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 BOKQ9UMX3 212 aaPredicted RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 WBP11Q9Y2W2 641 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 CHCHD2Q9Y6H1 151 aaPredicted RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 CLCA3PQ9Y6N3 262 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 TENM1Q9UKZ4 2725 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 hCG_1809904A0A1W2PP81 198 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 A0A1W2PPE2 198 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 A0A1W2PR64 198 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 TRIM64A6NGJ6 449 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 TRIM64BA6NI03 449 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 SDR42E2A6NKP2 422 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 DEFB108AA8MXU0 73 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 SMPD2O60906 423 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 SCELO95171 688 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 ETHE1O95571 254 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 IGLV2-14P01704 120 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 SERPIND1P05546 499 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 HPNP05981 417 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 HIST1H2AGP0C0S8 130 aaPredicted RBP4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 HIST1H2ADP20671 130 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 LOXP28300 417 aaPredicted RBP4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 HNF4AP41235 474 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 CDK9P50750 372 aaKnown RBP4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 CDKN2DP55273 166 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 LIM2P55344 173 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 STXBP1P61764 594 aaKnown RBP4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 BASP1P80723 227 aaKnown RBP4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 PPP2R2BQ00005 443 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 CDKL1Q00532 357 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 FOXF2Q12947 444 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 SNX1Q13596 522 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 SERTAD2Q14140 314 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 EFTUD2Q15029 972 aaKnown RBP eCLIP4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 SF3B4Q15427 424 aaKnown RBP eCLIP4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 ACKR1Q16570 336 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 SMN1Q16637 294 aaKnown RBP4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 C2orf68Q2NKX9 166 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 ZNF628Q5EBL2 1059 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 LRIF1Q5T3J3 769 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 ANKRD22Q5VYY1 191 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 SLC22A10Q63ZE4 541 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 SBSNQ6UWP8 590 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 ZNF782Q6ZMW2 699 aaPredicted RBP4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 YTHDF3Q7Z739 585 aaKnown RBP4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 HAPLN4Q86UW8 402 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 CNTN4Q8IWV2 1026 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 PHC2Q8IXK0 858 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 C9orf40Q8IXQ3 194 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 ZNF441Q8N8Z8 693 aa4.15□□□□□ -1.75
CDC42EP3-202ENST00000422687 C9orf106Q8NAJ2 232 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms