RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 IDH2P48735 452 aaKnown RBP23.62■■□□□ 1.37
CDK9-202ENST00000421939 ARFIP2P53365 341 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 SF3A3Q12874 501 aaKnown RBP eCLIP23.62■■□□□ 1.37
CDK9-202ENST00000421939 LARS2Q15031 903 aaKnown RBP23.62■■□□□ 1.37
CDK9-202ENST00000421939 RNF220Q5VTB9 566 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 DHDDSQ86SQ9 333 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 ZZZ3Q8IYH5 903 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 ZNF440Q8IYI8 595 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 C10orf111Q8N326 155 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 DPP10Q8N608 796 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 BBS10Q8TAM1 723 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 RNF128Q8TEB7 428 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 REXO5Q96IC2 774 aaKnown RBP23.62■■□□□ 1.37
CDK9-202ENST00000421939 LURAP1Q96LR2 239 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 CPPED1Q9BRF8 314 aaPredicted RBP23.62■■□□□ 1.37
CDK9-202ENST00000421939 OPN3Q9H1Y3 402 aaPredicted RBP23.62■■□□□ 1.37
CDK9-202ENST00000421939 IKZF5Q9H5V7 419 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 RLIMQ9NVW2 624 aa23.62■■□□□ 1.37
CDK9-202ENST00000421939 SPIN1Q9Y657 262 aaPredicted RBP23.62■■□□□ 1.37
CDK9-202ENST00000421939 A0A1W2PNR3 127 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 CFAP73A6NFT4 308 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 C5orf58C9J3I9 102 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 FAAHO00519 579 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 PABPC4LP0CB38 370 aaKnown RBP23.61■■□□□ 1.37
CDK9-202ENST00000421939 ARAFP10398 606 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 CD8BP10966 210 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 UQCRBP14927 111 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 APOBEC1P41238 236 aaKnown RBP23.61■■□□□ 1.37
CDK9-202ENST00000421939 CTBP2P56545 445 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 ZSWIM7Q19AV6 140 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 SYT14P1Q58G82 188 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 RETREG3Q86VR2 466 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 OR6K3Q8NGY3 331 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 FAM222BQ8WU58 562 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 ROBO4Q8WZ75 1007 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 OR5B2Q96R09 309 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 CTPS2Q9NRF8 586 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 GLRX2Q9NS18 164 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 MRGBPQ9NV56 204 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 CHRNA9Q9UGM1 479 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 PROCRQ9UNN8 238 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 POLQO75417 2590 aa23.61■■□□□ 1.37
CDK9-202ENST00000421939 TUBAL3A6NHL2 446 aa23.6■■□□□ 1.37
CDK9-202ENST00000421939 EVPLLA8MZ36 301 aa23.6■■□□□ 1.37
CDK9-202ENST00000421939 CGAP01215 116 aa23.6■■□□□ 1.37
CDK9-202ENST00000421939 MDH1P40925 334 aaKnown RBP23.6■■□□□ 1.37
CDK9-202ENST00000421939 EPS8Q12929 822 aa23.6■■□□□ 1.37
CDK9-202ENST00000421939 ABHD3Q8WU67 409 aa23.6■■□□□ 1.37
CDK9-202ENST00000421939 IFT52Q9Y366 437 aa23.6■■□□□ 1.37
CDK9-202ENST00000421939 CSMD2Q7Z408 3487 aa23.59■■□□□ 1.37
CDK9-202ENST00000421939 PGM3O95394 542 aa23.59■■□□□ 1.37
CDK9-202ENST00000421939 GPX2P18283 190 aa23.59■■□□□ 1.37
CDK9-202ENST00000421939 HTR3AP46098 478 aa23.59■■□□□ 1.37
CDK9-202ENST00000421939 KRTAP10-9P60411 292 aa23.59■■□□□ 1.37
CDK9-202ENST00000421939 RAC3P60763 192 aa23.59■■□□□ 1.37
CDK9-202ENST00000421939 GTF2IRD2BQ6EKJ0 949 aa23.59■■□□□ 1.37
CDK9-202ENST00000421939 ZNF474Q6S9Z5 364 aaPredicted RBP23.59■■□□□ 1.37
CDK9-202ENST00000421939 GTF2IRD2Q86UP8 949 aa23.59■■□□□ 1.37
CDK9-202ENST00000421939 NFKBIDQ8NI38 313 aa23.59■■□□□ 1.37
CDK9-202ENST00000421939 SPATA9Q9BWV2 254 aa23.59■■□□□ 1.37
CDK9-202ENST00000421939 ZNF232Q9UNY5 417 aa23.59■■□□□ 1.37
CDK9-202ENST00000421939 AGTR1P30556 359 aa23.58■■□□□ 1.37
CDK9-202ENST00000421939 SLC1A3P43003 542 aa23.58■■□□□ 1.37
CDK9-202ENST00000421939 CDK6Q00534 326 aa23.58■■□□□ 1.37
CDK9-202ENST00000421939 NFYCQ13952 458 aa23.58■■□□□ 1.37
CDK9-202ENST00000421939 RNPS1Q15287 305 aaKnown RBP23.58■■□□□ 1.37
CDK9-202ENST00000421939 RUNDC3AQ59EK9 446 aa23.58■■□□□ 1.37
CDK9-202ENST00000421939 FCRLAQ7L513 359 aa23.58■■□□□ 1.37
CDK9-202ENST00000421939 CLIP4Q8N3C7 705 aa23.58■■□□□ 1.37
CDK9-202ENST00000421939 CGREF1Q99674 301 aa23.58■■□□□ 1.37
CDK9-202ENST00000421939 TMEM38AQ9H6F2 299 aa23.58■■□□□ 1.37
CDK9-202ENST00000421939 ARMC7Q9H6L4 198 aa23.58■■□□□ 1.37
CDK9-202ENST00000421939 KLHL14Q9P2G3 628 aa23.58■■□□□ 1.37
CDK9-202ENST00000421939 PDZD2O15018 2839 aa23.58■■□□□ 1.36
CDK9-202ENST00000421939 CREBBPQ92793 2442 aa23.57■■□□□ 1.36
CDK9-202ENST00000421939 GKN3PP0CG01 181 aa23.57■■□□□ 1.36
CDK9-202ENST00000421939 TFPIP10646 304 aa23.57■■□□□ 1.36
CDK9-202ENST00000421939 ETS2P15036 469 aa23.57■■□□□ 1.36
CDK9-202ENST00000421939 PCYT1AP49585 367 aa23.57■■□□□ 1.36
CDK9-202ENST00000421939 POLR2HP52434 150 aaKnown RBP23.57■■□□□ 1.36
CDK9-202ENST00000421939 ZNF311Q5JNZ3 666 aa23.57■■□□□ 1.36
CDK9-202ENST00000421939 REEP3Q6NUK4 255 aa23.57■■□□□ 1.36
CDK9-202ENST00000421939 ZNF550Q7Z398 422 aa23.57■■□□□ 1.36
CDK9-202ENST00000421939 TMEM200AQ86VY9 491 aa23.57■■□□□ 1.36
CDK9-202ENST00000421939 ANKRD27Q96NW4 1050 aa23.57■■□□□ 1.36
CDK9-202ENST00000421939 ZNF317Q96PQ6 595 aaPredicted RBP23.57■■□□□ 1.36
CDK9-202ENST00000421939 CHST2Q9Y4C5 530 aa23.57■■□□□ 1.36
CDK9-202ENST00000421939 MYO9AB2RTY4 2548 aa23.56■■□□□ 1.36
CDK9-202ENST00000421939 TMED7-TICAM2A0A0A6YYA0 188 aa23.56■■□□□ 1.36
CDK9-202ENST00000421939 IGHV3-15A0A0B4J1V0 119 aa23.56■■□□□ 1.36
CDK9-202ENST00000421939 ENPP1P22413 925 aa23.56■■□□□ 1.36
CDK9-202ENST00000421939 FKBP2P26885 142 aaKnown RBP23.56■■□□□ 1.36
CDK9-202ENST00000421939 CD79BP40259 229 aa23.56■■□□□ 1.36
CDK9-202ENST00000421939 DIO1P49895 249 aa23.56■■□□□ 1.36
CDK9-202ENST00000421939 SCARB2Q14108 478 aa23.56■■□□□ 1.36
CDK9-202ENST00000421939 TMPPEQ6ZT21 453 aa23.56■■□□□ 1.36
CDK9-202ENST00000421939 ADGRG3Q86Y34 549 aa23.56■■□□□ 1.36
CDK9-202ENST00000421939 KRT73Q86Y46 540 aa23.56■■□□□ 1.36
CDK9-202ENST00000421939 SLC43A2Q8N370 569 aa23.56■■□□□ 1.36
CDK9-202ENST00000421939 ZNF610Q8N9Z0 462 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms