RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 WDR31Q8NA23 367 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 TOR1AIP2Q8NFQ8 470 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 KIF18AQ8NI77 898 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 EPS8L3Q8TE67 593 aaKnown RBP7.12□□□□□ -1.27
VIM-202ENST00000421459 C10orf105Q8TEF2 133 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 OR5P2Q8WZ92 322 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 ZG16BQ96DA0 208 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 MTERF3Q96E29 417 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 METTL2AQ96IZ6 378 aaKnown RBP7.12□□□□□ -1.27
VIM-202ENST00000421459 ARL5BQ96KC2 179 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 ADAD1Q96M93 576 aaKnown RBP7.12□□□□□ -1.27
VIM-202ENST00000421459 DHRS9Q9BPW9 319 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 GRIP2Q9C0E4 1043 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 OR11A1Q9GZK7 315 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 HOXD1Q9GZZ0 328 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 IQCGQ9H095 443 aaKnown RBP7.12□□□□□ -1.27
VIM-202ENST00000421459 CTPS2Q9NRF8 586 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 CBLN4Q9NTU7 201 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 NOSIPQ9Y314 301 aaKnown RBP7.12□□□□□ -1.27
VIM-202ENST00000421459 TRAF6Q9Y4K3 522 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 ATP23Q9Y6H3 246 aa7.12□□□□□ -1.27
VIM-202ENST00000421459 GOLGA8QA0A0J9YX86 632 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 GOLGA8OA6NCC3 632 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 ELOA3DA6NLF2 546 aaPredicted RBP7.11□□□□□ -1.27
VIM-202ENST00000421459 GOLGA8NF8WBI6 632 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 H3BQF6 201 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 ETV2O00321 342 aaPredicted RBP7.11□□□□□ -1.27
VIM-202ENST00000421459 EIF4E2O60573 245 aaKnown RBP7.11□□□□□ -1.27
VIM-202ENST00000421459 UGT2B17O75795 530 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 HSPA4LO95757 839 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 ITGA5P08648 1049 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 TFPIP10646 304 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 NEFHP12036 1026 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 MATN1P21941 496 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 RYKP34925 604 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 HPCAL1P37235 193 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 ASMTP46597 345 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 SUMO3P55854 103 aaPredicted RBP7.11□□□□□ -1.27
VIM-202ENST00000421459 VLDLRP98155 873 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 PLAURQ03405 335 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 GABRA6Q16445 453 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 NRF1Q16656 503 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 PGS1Q32NB8 556 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 ELOA3BQ3SY89 546 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 SYT14P1Q58G82 188 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 C6orf136Q5SQH8 315 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 FBXW9Q5XUX1 488 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 CYB5R2Q6BCY4 276 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 ABLIM2Q6H8Q1 611 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 OR4F3Q6IEY1 312 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 C3orf33Q6P1S2 294 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 TMEM108Q6UXF1 575 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 C6orf120Q7Z4R8 191 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 R3HCC1LQ7Z5L2 792 aaKnown RBP7.11□□□□□ -1.27
VIM-202ENST00000421459 MTDHQ86UE4 582 aaKnown RBP7.11□□□□□ -1.27
VIM-202ENST00000421459 IFT20Q8IY31 132 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 MNS1Q8NEH6 495 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 ELOA3Q8NG57 546 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 OR56A1Q8NGH5 318 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 PSMA8Q8TAA3 256 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 FAM168AQ92567 244 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 RAB8BQ92930 207 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 C3orf49Q96BT1 292 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 COQ8BQ96D53 544 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 RADILQ96JH8 1075 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 C19orf24Q9BVV8 132 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 LAT2Q9GZY6 243 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 CHODLQ9H9P2 273 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 L2HGDHQ9H9P8 463 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 HHATLQ9HCP6 504 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 FAIMQ9NVQ4 179 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 SLC17A7Q9P2U7 560 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 ZDHHC2Q9UIJ5 367 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 CDC42EP3Q9UKI2 254 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 TMED5Q9Y3A6 229 aa7.11□□□□□ -1.27
VIM-202ENST00000421459 IGKV3D-15A0A087WSY6 115 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 PRAMEF27A3QJZ7 478 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 KLF11O14901 512 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 LMX1BO60663 402 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 TRIM13O60858 407 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 DNAJA2O60884 412 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 SPAG7O75391 227 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 SKAP2O75563 359 aaPredicted RBP7.1□□□□□ -1.27
VIM-202ENST00000421459 CHEK2O96017 543 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
VIM-202ENST00000421459 CSTAP01040 98 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 C8BP07358 591 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 FGF4P08620 206 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 DHRS4L1P0CG22 281 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 OR12D1P0DN82 309 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 IGFBP5P24593 272 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 PTAFRP25105 342 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 OR2B6P58173 313 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 NAA20P61599 178 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 LSM11P83369 360 aaKnown RBP eCLIP7.1□□□□□ -1.27
VIM-202ENST00000421459 FUT5Q11128 374 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 GGTLC2Q14390 218 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 ZNF141Q15928 474 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 MST1LQ2TV78 715 aa7.1□□□□□ -1.27
VIM-202ENST00000421459 XKR7Q5GH72 579 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms