RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 A0A087WUJ7 227 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 DAPL1A0PJW8 107 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 GTPBP1O00178 669 aaKnown RBP17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 SOX1O00570 391 aaPredicted RBP17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 CASKO14936 926 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 SNPHO15079 494 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 REM1O75628 298 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 GPR143P51810 404 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 CAV3P56539 151 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 CSTF1Q05048 431 aaKnown RBP17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 CBX3Q13185 183 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 SELENBP1Q13228 472 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 KLHL12Q53G59 568 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 FCRLBQ6BAA4 426 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 ARHGAP11AQ6P4F7 1023 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 GDPD1Q8N9F7 314 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 OR7G1Q8NGA0 311 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 OIT3Q8WWZ8 545 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 ATF6BQ99941 703 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 SACM1LQ9NTJ5 587 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 PRODH2Q9UF12 536 aa17.41■□□□□ 0.38
CROCCP3-202ENST00000420820 FABP12A6NFH5 140 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 POLR1CO15160 346 aaPredicted RBP17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 CLUP10909 449 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 ADH7P40394 386 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 RFX2P48378 723 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 EIF2B2P49770 351 aaKnown RBP17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 PGDP52209 483 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 EPHA4P54764 986 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 NXPH1P58417 271 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 PPP3R1P63098 170 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 ZNF85Q03923 595 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 DBPQ10586 325 aaPredicted RBP17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 FNDC7Q5VTL7 733 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 GATAD2AQ86YP4 633 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 CADM2Q8N3J6 435 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 METTL27Q8N6F8 245 aaPredicted RBP17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 DIRAS2Q96HU8 199 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 RNF32Q9H0A6 362 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 FBXL4Q9UKA2 621 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 ZMIZ1Q9ULJ6 1067 aa17.4■□□□□ 0.38
CROCCP3-202ENST00000420820 SMIM30A4D0T7 59 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 PLPP2O43688 288 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 RGS9O75916 674 aaPredicted RBP17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 CSTAP01040 98 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 GRM7Q14831 915 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 NNATQ16517 81 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 DEFB133Q30KQ1 61 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 NDUFAF6Q330K2 333 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 C14orf28Q4W4Y0 310 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 FAM131AQ6UXB0 335 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 CELF2-AS1Q8N7Q2 184 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 OR10H4Q8NGA5 316 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 OR51V1Q9H2C8 321 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 UBE2ZQ9H832 354 aaPredicted RBP17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 TRIM36Q9NQ86 728 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 TIGARQ9NQ88 270 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 SOHLH2Q9NX45 425 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 OR10H1Q9Y4A9 318 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 A0A1W2PQ09 198 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 CD8B2A6NJW9 211 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 NDUFB2O95178 105 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 IFNGP01579 166 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 MT-ND5P03915 603 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 CSF3P09919 207 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 CD8BP10966 210 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 CFL1P23528 166 aaKnown RBP17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 HNRNPKP61978 463 aaKnown RBP eCLIP17.39■□□□□ 0.374e-6■■■■□ 22.9
CROCCP3-202ENST00000420820 NRARPQ7Z6K4 114 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 GPALPP1Q8IXQ4 340 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 ZNF440Q8IYI8 595 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 CAMKK1Q8N5S9 505 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 CYB561A3Q8NBI2 242 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 OR5M3Q8NGP4 307 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 OR5W2Q8NH69 310 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 PTPMT1Q8WUK0 201 aaPredicted RBP17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 SGTBQ96EQ0 304 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 ZDHHC12Q96GR4 267 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 TBX5Q99593 518 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 MKKSQ9NPJ1 570 aaPredicted RBP17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 RPS6KB2Q9UBS0 482 aa17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 TP53BP1Q12888 1972 aaPredicted RBP17.39■□□□□ 0.37
CROCCP3-202ENST00000420820 C2orf92A0A1B0GVN3 265 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 DVL2O14641 736 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 IFNA16P05015 189 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 AZGP1P25311 298 aaKnown RBP17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 MTNR1BP49286 362 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 POU4F2Q12837 409 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 ASAH1Q13510 395 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 SPATC1Q76KD6 591 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 SMPDL3BQ92485 455 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 C3orf49Q96BT1 292 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 CCNL2Q96S94 520 aaPredicted RBP17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 DDOQ99489 341 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 PPP1R3EQ9H7J1 279 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 ERVMER34-1Q9H9K5 563 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 GMEB2Q9UKD1 530 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 MMACHCQ9Y4U1 282 aa17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 COL5A1P20908 1838 aaPredicted RBP17.38■□□□□ 0.37
CROCCP3-202ENST00000420820 E9PI62 339 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms