RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DKKL1Q9UK85 242 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 CAMK2AQ9UQM7 478 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 TACC2O95359 2948 aa6.26□□□□□ -1.41
HMGN1-205ENST00000419378 GOLGA8QA0A0J9YX86 632 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 GOLGA8OA6NCC3 632 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 NKX2-6A6NCS4 301 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 TRPC5OSA6NMA1 111 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 AHRRA9YTQ3 701 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 KDM4EB2RXH2 506 aaPredicted RBP6.25□□□□□ -1.41
HMGN1-205ENST00000419378 GOLGA8NF8WBI6 632 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 KLF11O14901 512 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 ANKRD28O15084 1053 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 HDAC3O15379 428 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 CFLARO15519 480 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 TOXO94900 526 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 KCNK2O95069 426 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 NGFRP08138 427 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 HOXD4P09016 255 aaPredicted RBP6.25□□□□□ -1.41
HMGN1-205ENST00000419378 ALDOCP09972 364 aaKnown RBP6.25□□□□□ -1.41
HMGN1-205ENST00000419378 KITP10721 976 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 COX6B1P14854 86 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 H2AFXP16104 143 aaPredicted RBP6.25□□□□□ -1.41
HMGN1-205ENST00000419378 TCEA1P23193 301 aaKnown RBP6.25□□□□□ -1.41
HMGN1-205ENST00000419378 DPP4P27487 766 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 EPHA3P29320 983 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 SOAT1P35610 550 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 CCT3P49368 545 aaKnown RBP6.25□□□□□ -1.41
HMGN1-205ENST00000419378 CLK3P49761 638 aaKnown RBP6.25□□□□□ -1.41
HMGN1-205ENST00000419378 WNT3P56703 355 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 HBA1P69905 142 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 FOXL1Q12952 345 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 TP53BP2Q13625 1128 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 GANABQ14697 944 aaKnown RBP6.25□□□□□ -1.41
HMGN1-205ENST00000419378 LSM12Q3MHD2 195 aaKnown RBP6.25□□□□□ -1.41
HMGN1-205ENST00000419378 TTMPQ5BVD1 217 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 SPANXN4Q5MJ08 99 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 CCNJQ5T5M9 372 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 RIPPLY2Q5TAB7 128 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 CDC73Q6P1J9 531 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 APOOLQ6UXV4 268 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 DOK3Q7L591 496 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 MAVSQ7Z434 540 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 MARCH3Q86UD3 253 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 PM20D2Q8IYS1 436 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 FADS6Q8N9I5 356 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 OR2M3Q8NG83 312 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 OR8J2Q8NGG1 315 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 OR10Q1Q8NGQ4 319 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 OR5AK3PQ8NH89 298 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 LILRB4Q8NHJ6 448 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 FAM110BQ8TC76 370 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 DUSP19Q8WTR2 217 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 TESCQ96BS2 214 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 MOAP1Q96BY2 351 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 DTNBP1Q96EV8 351 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 CHMP6Q96FZ7 201 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 WDYHV1Q96HA8 205 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 ATP6V1G3Q96LB4 118 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 SFXN2Q96NB2 322 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 STACQ99469 402 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 ACTRT3Q9BYD9 372 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 TBL1XR1Q9BZK7 514 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 UCK2Q9BZX2 261 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 DPY30Q9C005 99 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 DSN1Q9H410 356 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 WDR55Q9H6Y2 383 aaPredicted RBP6.25□□□□□ -1.41
HMGN1-205ENST00000419378 SDHAF3Q9NRP4 125 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 DUSP22Q9NRW4 184 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 AIG1Q9NVV5 245 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 FBXO34Q9NWN3 711 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 GIN1Q9NXP7 522 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 MED11Q9P086 117 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 MRPS18CQ9Y3D5 142 aaKnown RBP6.25□□□□□ -1.41
HMGN1-205ENST00000419378 ARHGAP21Q5T5U3 1957 aa6.25□□□□□ -1.41
HMGN1-205ENST00000419378 CACNA1DQ01668 2161 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 NUP214P35658 2090 aaPredicted RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ANKHD1Q8IWZ3 2542 aaKnown RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 IGLV3-32A0A0A0MS00 114 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 RNF103-CHMP3A0A140T963 221 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 A0A1W2PPL8 197 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 C9JVG2 144 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 E9PBE3 544 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 SLCO1B7G3V0H7 640 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 H0Y3Z8 333 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 RNASET2O00584 256 aaKnown RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ZIC3O60481 467 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 SCN2BO60939 215 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 OXSR1O95747 527 aaPredicted RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ANGPTL1O95841 491 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 EPPINO95925 133 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 KRT16P08779 473 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 INHBBP09529 407 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 PRF1P14222 555 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 CPN1P15169 458 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ZNF708P17019 499 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 HK1P19367 917 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 TBXA2RP21731 343 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 LCN1P31025 176 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ZFP36L2P47974 494 aaKnown RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 STARP49675 285 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms