RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 TAMM41Q96BW9 452 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 SDCCAG3Q96C92 435 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 ZNF845Q96IR2 970 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-204ENST00000418628 HOPXQ9BPY8 73 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-204ENST00000418628 ECSITQ9BQ95 431 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 ADAM19Q9H013 955 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 TMEM185BQ9H7F4 350 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 ARL8BQ9NVJ2 186 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 STOML1Q9UBI4 398 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 AP3M1Q9Y2T2 418 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 KLF2Q9Y5W3 355 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-204ENST00000418628 UNC79Q9P2D8 2635 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 CENPEQ02224 2701 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 CRYBG3Q68DQ2 2970 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 PRORSD1PA6NEY8 169 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 CCT8L1PA6NM43 557 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 SYT5O00445 386 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 EIF1AYO14602 144 aaKnown RBP16.74■□□□□ 0.27
PTCD3-204ENST00000418628 SERPINB7O75635 380 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 RCBTB2O95199 551 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 CLDN14O95500 239 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 CD247P20963 164 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 ME2P23368 584 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 APOBEC1P41238 236 aaKnown RBP16.74■□□□□ 0.27
PTCD3-204ENST00000418628 SLC1A3P43003 542 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 HTR3AP46098 478 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 IDH2P48735 452 aaKnown RBP16.74■□□□□ 0.27
PTCD3-204ENST00000418628 RPS3AP61247 264 aaKnown RBP16.74■□□□□ 0.27
PTCD3-204ENST00000418628 TFF3Q07654 80 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 MERTKQ12866 999 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 GUSBP1Q15486 140 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 INTS11Q5TA45 600 aaKnown RBP16.74■□□□□ 0.27
PTCD3-204ENST00000418628 MAMDC2Q7Z304 686 aaPredicted RBP16.74■□□□□ 0.27
PTCD3-204ENST00000418628 PATL1Q86TB9 770 aaKnown RBP16.74■□□□□ 0.27
PTCD3-204ENST00000418628 ADGRG3Q86Y34 549 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 ARMC8Q8IUR7 673 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 CCDC71Q8IV32 467 aaPredicted RBP16.74■□□□□ 0.27
PTCD3-204ENST00000418628 ACBD4Q8NC06 268 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 GPR32P1Q8NGA4 272 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 LILRB4Q8NHJ6 448 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 SLC25A43Q8WUT9 341 aaPredicted RBP16.74■□□□□ 0.27
PTCD3-204ENST00000418628 TM9SF2Q99805 663 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 ARMC7Q9H6L4 198 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 EVA1AQ9H8M9 152 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 CACYBPQ9HB71 228 aaKnown RBP16.74■□□□□ 0.27
PTCD3-204ENST00000418628 CTPS2Q9NRF8 586 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 PAQR5Q9NXK6 330 aaPredicted RBP16.74■□□□□ 0.27
PTCD3-204ENST00000418628 COQ3Q9NZJ6 369 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 CHRNA9Q9UGM1 479 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 OSGIN1Q9UJX0 560 aa16.74■□□□□ 0.27
PTCD3-204ENST00000418628 HSPB2A8KAH6 182 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 TMEM229AB2RXF0 380 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 TNFSF11O14788 317 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 FRS3O43559 492 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 GP1BBP13224 206 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 KCNJ5P48544 419 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 SLC7A2P52569 658 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 KRT72Q14CN4 511 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 HSPB2Q16082 182 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 NRF1Q16656 503 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 LIX1LQ8IVB5 337 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 RELL2Q8NC24 303 aaPredicted RBP16.73■□□□□ 0.27
PTCD3-204ENST00000418628 CCDC197Q8NCU1 140 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 OR2T12Q8NG77 320 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 ZNF563Q8TA94 476 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 FIG4Q92562 907 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 ARHGDIGQ99819 225 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 WFDC6Q9BQY6 131 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 RNF122Q9H9V4 155 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 GMPR2Q9P2T1 348 aaKnown RBP16.73■□□□□ 0.27
PTCD3-204ENST00000418628 TAGLN3Q9UI15 199 aa16.73■□□□□ 0.27
PTCD3-204ENST00000418628 SLC22A20A6NK97 555 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 GJE1A6NN92 205 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 M0QX08 132 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 LGI1O95970 557 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 IL18BPO95998 194 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 OPN1SWP03999 348 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 C8BP07358 591 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 UQCRBP14927 111 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 HTR2AP28223 471 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 SFTPDP35247 375 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 POLR2HP52434 150 aaKnown RBP16.72■□□□□ 0.27
PTCD3-204ENST00000418628 PON3Q15166 354 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 ZNF239Q16600 458 aaKnown RBP16.72■□□□□ 0.27
PTCD3-204ENST00000418628 DUSP7Q16829 419 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 SYT14P1Q58G82 188 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 WBP2NLQ6ICG8 309 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 C6orf89Q6UWU4 347 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 MICU2Q8IYU8 434 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 LSMEM1Q8N8F7 131 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 FNDC9Q8TBE3 224 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 C3orf49Q96BT1 292 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 SRXN1Q9BYN0 137 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 PIF1Q9H611 641 aa16.72■□□□□ 0.27
PTCD3-204ENST00000418628 PLEKHB1Q9UF11 243 aaPredicted RBP16.72■□□□□ 0.27
PTCD3-204ENST00000418628 TESQ9UGI8 421 aaKnown RBP16.72■□□□□ 0.27
PTCD3-204ENST00000418628 CACNA1DQ01668 2161 aa16.71■□□□□ 0.27
PTCD3-204ENST00000418628 ZNF208O43345 1280 aa16.71■□□□□ 0.27
PTCD3-204ENST00000418628 CXCL13O43927 109 aa16.71■□□□□ 0.27
PTCD3-204ENST00000418628 TPST2O60704 377 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms