RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CARNMT1Q8N4J0 409 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ATPAF2Q8N5M1 289 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TMEM178AQ8NBL3 297 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CHDHQ8NE62 594 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 BPIFB6Q8NFQ5 453 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 OR7G1Q8NGA0 311 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 OR4K1Q8NGD4 311 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 OR4C3Q8NH37 302 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 SPATA3Q8NHX4 192 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 MCFD2Q8NI22 146 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ANGPTL6Q8NI99 470 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ITFG1Q8TB96 612 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 STAG3L4Q8TBR4 150 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 DYNC2LI1Q8TCX1 351 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 BLOC1S5Q8TDH9 187 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 HEXDCQ8WVB3 486 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TWIST2Q8WVJ9 160 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 HPSE2Q8WWQ2 592 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 SUSD6Q92537 303 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 PIK3R3Q92569 461 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 PROX1Q92786 737 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TMBIM1Q969X1 311 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 C18orf25Q96B23 403 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 SPSB1Q96BD6 273 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 BIRC7Q96CA5 298 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TUBGCP3Q96CW5 907 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 YIPF6Q96EC8 236 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ZBED3Q96IU2 234 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 RNF145Q96MT1 663 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ZNF300Q96RE9 604 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 ZBTB18Q99592 522 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 IL12RB2Q99665 862 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 OMDQ99983 421 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 NAA11Q9BSU3 229 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 CCDC32Q9BV29 185 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CHID1Q9BWS9 393 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 DUSP16Q9BY84 665 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 HOXD1Q9GZZ0 328 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 NAA50Q9GZZ1 169 aaKnown RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 NACA2Q9H009 215 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 RACGAP1Q9H0H5 632 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 FAM49AQ9H0Q0 323 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 GABARAPL1Q9H0R8 117 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 MFSD1Q9H3U5 465 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 DSN1Q9H410 356 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ARMC7Q9H6L4 198 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 KAT8Q9H7Z6 458 aaKnown RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 SIAEQ9HAT2 523 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CDH20Q9HBT6 801 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 NEK6Q9HC98 313 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 MID1IP1Q9NPA3 183 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ZNF71Q9NQZ8 489 aaPredicted RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 TREX1Q9NSU2 369 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 FAM49BQ9NUQ9 324 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 AIG1Q9NVV5 245 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 CMTM6Q9NX76 183 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 QPCTLQ9NXS2 382 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ERAP1Q9NZ08 941 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ZNF221Q9UK13 617 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 FBXO5Q9UKT4 447 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 UBQLN1Q9UMX0 589 aaKnown RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 STUB1Q9UNE7 303 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 WDR83OSQ9Y284 106 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 TRAPPC4Q9Y296 219 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 BTRCQ9Y297 605 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 KCNK7Q9Y2U2 307 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 FIS1Q9Y3D6 152 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 DNAJC15Q9Y5T4 150 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 PEX16Q9Y5Y5 336 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 ZNF638Q14966 1978 aaKnown RBP2.35□□□□□ -2.03
VPS41-206ENST00000418457 SHROOM3Q8TF72 1996 aa2.35□□□□□ -2.03
VPS41-206ENST00000418457 MYLKQ15746 1914 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SCN1AP35498 2009 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 PATJQ8NI35 1801 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 LOC100130705A0A1B0GUX0 176 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CENPXA8MT69 81 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 PDZK1P1A8MUH7 402 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 EFCAB9A8MZ26 197 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 FAM220BPB1ANY3 271 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 H7C0S8 307 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 UPK1AO00322 258 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 BCKDKO14874 412 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 HAT1O14929 419 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 RAD51BO15315 384 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 STX7O15400 261 aaKnown RBP2.34□□□□□ -2.03
VPS41-206ENST00000418457 ZW10O43264 779 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 B4GALT5O43286 388 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 DPM1O60762 260 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 HUS1O60921 280 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 KERAO60938 352 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 UGT2B17O75795 530 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CDK14O94921 469 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 AP2A2O94973 939 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CLIC3O95833 236 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 ANGPTL1O95841 491 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 SLC25A27O95847 323 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 CST1P01037 141 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 JCHAINP01591 159 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 IGLV1-44P01699 117 aa2.34□□□□□ -2.03
VPS41-206ENST00000418457 APOHP02749 345 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms