RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 UQCRC2P22695 453 aa19.29■□□□□ 0.68
ACTB-203ENST00000417101 PPP2R2BQ00005 443 aa19.29■□□□□ 0.68
ACTB-203ENST00000417101 ZNF672Q499Z4 452 aaPredicted RBP19.29■□□□□ 0.68
ACTB-203ENST00000417101 SYT14P1Q58G82 188 aa19.29■□□□□ 0.68
ACTB-203ENST00000417101 ANXA8L1Q5VT79 327 aa19.29■□□□□ 0.68
ACTB-203ENST00000417101 TYW3Q6IPR3 259 aaKnown RBP19.29■□□□□ 0.68
ACTB-203ENST00000417101 GALNT5Q7Z7M9 940 aa19.29■□□□□ 0.68
ACTB-203ENST00000417101 PRIMA1Q86XR5 153 aa19.29■□□□□ 0.68
ACTB-203ENST00000417101 ZNF100Q8IYN0 542 aa19.29■□□□□ 0.68
ACTB-203ENST00000417101 KBTBD8Q8NFY9 601 aa19.29■□□□□ 0.68
ACTB-203ENST00000417101 SLC25A43Q8WUT9 341 aaPredicted RBP19.29■□□□□ 0.68
ACTB-203ENST00000417101 ROPN1LQ96C74 230 aa19.29■□□□□ 0.68
ACTB-203ENST00000417101 ANK3Q12955 4377 aaKnown RBP19.29■□□□□ 0.68
ACTB-203ENST00000417101 RGS16O15492 202 aaPredicted RBP19.28■□□□□ 0.68
ACTB-203ENST00000417101 TFPIP10646 304 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 RYKP34925 604 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 PGM1P36871 562 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 RPL14P50914 215 aaKnown RBP19.28■□□□□ 0.68
ACTB-203ENST00000417101 CSNK2A1P68400 391 aaPredicted RBP19.28■□□□□ 0.68
ACTB-203ENST00000417101 CLEC12BQ2HXU8 276 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 SAXO2Q658L1 398 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 WDR93Q6P2C0 686 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 HMGN2P46Q86SG4 172 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 FAM71CQ8NEG0 241 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 VPS37AQ8NEZ2 397 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 ZNF563Q8TA94 476 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 GTPBP3Q969Y2 492 aaKnown RBP19.28■□□□□ 0.68
ACTB-203ENST00000417101 TESCQ96BS2 214 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 TRMT61AQ96FX7 289 aaKnown RBP19.28■□□□□ 0.68
ACTB-203ENST00000417101 CTPS2Q9NRF8 586 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 POLE3Q9NRF9 147 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 SLC35A3Q9Y2D2 325 aa19.28■□□□□ 0.68
ACTB-203ENST00000417101 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.28■□□□□ 0.68
ACTB-203ENST00000417101 MAGED1Q9Y5V3 778 aaPredicted RBP19.28■□□□□ 0.68
ACTB-203ENST00000417101 A0A1W2PP18 115 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 ANKRD28O15084 1053 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 IGHV1-2P23083 117 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 CHI3L1P36222 383 aaPredicted RBP19.27■□□□□ 0.68
ACTB-203ENST00000417101 CDKN1AP38936 164 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 SLC1A6P48664 564 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 FUT5Q11128 374 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 VEZF1Q14119 521 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 CASP8Q14790 479 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 PPA1Q15181 289 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 SPANXN4Q5MJ08 99 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 FRRS1Q6ZNA5 592 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 MTDHQ86UE4 582 aaKnown RBP19.27■□□□□ 0.68
ACTB-203ENST00000417101 ZG16BQ96DA0 208 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 MUCL1Q96DR8 90 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 DNAJA3Q96EY1 480 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 SORT1Q99523 831 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 CCDC106Q9BWC9 280 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 NUF2Q9BZD4 464 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 SAP130Q9H0E3 1048 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.27■□□□□ 0.68
ACTB-203ENST00000417101 LIPT1Q9Y234 373 aa19.27■□□□□ 0.68
ACTB-203ENST00000417101 SPIN1Q9Y657 262 aaPredicted RBP19.27■□□□□ 0.68
ACTB-203ENST00000417101 V9GYY5 206 aaPredicted RBP19.27■□□□□ 0.68
ACTB-203ENST00000417101 RAMP1O60894 148 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 GUSBP08236 651 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 GGT1P19440 569 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 COX5AP20674 150 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 APOBEC1P41238 236 aaKnown RBP19.26■□□□□ 0.67
ACTB-203ENST00000417101 KHKP50053 298 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 FAPQ12884 760 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 GPAT3Q53EU6 434 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 ABLIM2Q6H8Q1 611 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 MREGQ8N565 214 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 OIT3Q8WWZ8 545 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 NEURL3Q96EH8 262 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 TRIM2Q9C040 744 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 EMC3Q9P0I2 261 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 MARCOQ9UEW3 520 aaPredicted RBP19.26■□□□□ 0.67
ACTB-203ENST00000417101 CHRNA9Q9UGM1 479 aa19.26■□□□□ 0.67
ACTB-203ENST00000417101 IGKV3D-15A0A087WSY6 115 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 PRAMEF27A3QJZ7 478 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 CLDN24A6NM45 220 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 KIAA1324LA8MWY0 1029 aaPredicted RBP19.25■□□□□ 0.67
ACTB-203ENST00000417101 RNF223E7ERA6 249 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 TM9SF1O15321 606 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 IGHV3-9P01782 118 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 C1QCP02747 245 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 DHRS4L1P0CG22 281 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 LBPP18428 481 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 BGNP21810 368 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 CLNS1AP54105 237 aaKnown RBP19.25■□□□□ 0.67
ACTB-203ENST00000417101 CHRNEQ04844 493 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 ETFDHQ16134 617 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 PGGHGQ32M88 737 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 FAM174BQ3ZCQ3 159 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 TIMM23BQ5SRD1 257 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 GRINAQ7Z429 371 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 UBE2J2Q8N2K1 259 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 MAPK1IP1LQ8NDC0 245 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 ZHX1-C8orf76Q96EF9 292 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 ARL5BQ96KC2 179 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 SLC35A5Q9BS91 424 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 OR11A1Q9GZK7 315 aa19.25■□□□□ 0.67
ACTB-203ENST00000417101 SSU72Q9NP77 194 aaKnown RBP19.25■□□□□ 0.67
ACTB-203ENST00000417101 NPAP1Q9NZP6 1156 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms