RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 LYVE1Q9Y5Y7 322 aa12.03□□□□□ -0.48
CNN3-203ENST00000415017 KALRNO60229 2985 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 ADAMDEC1O15204 470 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 DEAF1O75398 565 aaPredicted RBP12.02□□□□□ -0.49
CNN3-203ENST00000415017 IGHG3P01860 377 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 H1F0P07305 194 aaKnown RBP12.02□□□□□ -0.49
CNN3-203ENST00000415017 PNMTP11086 282 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 GP1BBP13224 206 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 TACR3P29371 465 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 RBM34P42696 430 aaKnown RBP12.02□□□□□ -0.49
CNN3-203ENST00000415017 YAP1P46937 504 aaKnown RBP12.02□□□□□ -0.49
CNN3-203ENST00000415017 COPZ1P61923 177 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 FOXK1P85037 733 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 ST3GAL3Q11203 375 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 NADK2Q4G0N4 442 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 NHSL2Q5HYW2 709 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 COLEC12Q5KU26 742 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 ZNF770Q6IQ21 691 aaPredicted RBP12.02□□□□□ -0.49
CNN3-203ENST00000415017 TMEM179BQ7Z7N9 219 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 SLC22A16Q86VW1 577 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 NKAIN4Q8IVV8 208 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 PQLC1Q8N2U9 271 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 FAM109AQ8N4B1 249 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 FAM83FQ8NEG4 500 aaPredicted RBP12.02□□□□□ -0.49
CNN3-203ENST00000415017 SLC7A13Q8TCU3 470 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 STMN2Q93045 179 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 DTNBP1Q96EV8 351 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 NRBF2Q96F24 287 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 CENPNQ96H22 339 aaPredicted RBP12.02□□□□□ -0.49
CNN3-203ENST00000415017 EPYCQ99645 322 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 TMEM43Q9BTV4 400 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 SLC25A18Q9H1K4 315 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 B4GALT7Q9UBV7 327 aa12.02□□□□□ -0.49
CNN3-203ENST00000415017 FAM32AQ9Y421 112 aaKnown RBP12.02□□□□□ -0.49
CNN3-203ENST00000415017 IGKV1D-42A0A075B6H8 117 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 A0A087WUU8 490 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 A0A1B0GVC2 190 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 OR2M5A3KFT3 312 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 LINC01387J3KSC0 135 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 CASQ2O14958 399 aaPredicted RBP12.01□□□□□ -0.49
CNN3-203ENST00000415017 ZNF208O43345 1280 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 RASAL1O95294 804 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 LDLRP01130 860 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 ANPEPP15144 967 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 CHMP24386 653 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 FKBP2P26885 142 aaKnown RBP12.01□□□□□ -0.49
CNN3-203ENST00000415017 ELK4P28324 431 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 RRM2P31350 389 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 MAGEA5P43359 124 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 CCR4P51679 360 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 ZNF41P51814 821 aaPredicted RBP12.01□□□□□ -0.49
CNN3-203ENST00000415017 POLR2HP52434 150 aaKnown RBP12.01□□□□□ -0.49
CNN3-203ENST00000415017 SMIM11AP58511 58 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 TAS2R41P59536 307 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 PPIAP62937 165 aaKnown RBP12.01□□□□□ -0.49
CNN3-203ENST00000415017 EGR4Q05215 589 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 FOXF1Q12946 379 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 TRAM2Q15035 370 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 ST3GAL2Q16842 350 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 CMPK2Q5EBM0 449 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 ALG10BQ5I7T1 473 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 RNF113BQ8IZP6 322 aaKnown RBP12.01□□□□□ -0.49
CNN3-203ENST00000415017 FAM98AQ8NCA5 519 aaKnown RBP12.01□□□□□ -0.49
CNN3-203ENST00000415017 ZNF563Q8TA94 476 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 ARHGAP9Q9BRR9 750 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 FNDC11Q9BVV2 318 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 SLC19A3Q9BZV2 496 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 RNPEPL1Q9HAU8 725 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 ZNF71Q9NQZ8 489 aaPredicted RBP12.01□□□□□ -0.49
CNN3-203ENST00000415017 CTPS2Q9NRF8 586 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 C6orf203Q9P0P8 240 aaPredicted RBP12.01□□□□□ -0.49
CNN3-203ENST00000415017 RHCGQ9UBD6 479 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 NKX1-2Q9UD57 310 aaPredicted RBP12.01□□□□□ -0.49
CNN3-203ENST00000415017 SLC7A7Q9UM01 511 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 TESMINQ9Y4I5 508 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 CFAP46Q8IYW2 2715 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 GTF3C1Q12789 2109 aa12.01□□□□□ -0.49
CNN3-203ENST00000415017 TMED7-TICAM2A0A0A6YYA0 188 aa12□□□□□ -0.49
CNN3-203ENST00000415017 TRBV4-1A0A0J9YWV2 114 aa12□□□□□ -0.49
CNN3-203ENST00000415017 SH3PXD2BA1X283 911 aa12□□□□□ -0.49
CNN3-203ENST00000415017 HTR3EA5X5Y0 456 aa12□□□□□ -0.49
CNN3-203ENST00000415017 ARRDC5A6NEK1 342 aa12□□□□□ -0.49
CNN3-203ENST00000415017 H0YHG0 523 aa12□□□□□ -0.49
CNN3-203ENST00000415017 GADD45GO95257 159 aa12□□□□□ -0.49
CNN3-203ENST00000415017 NUDT14O95848 222 aa12□□□□□ -0.49
CNN3-203ENST00000415017 CELA3AP09093 270 aa12□□□□□ -0.49
CNN3-203ENST00000415017 HK1P19367 917 aa12□□□□□ -0.49
CNN3-203ENST00000415017 IL11P20809 199 aa12□□□□□ -0.49
CNN3-203ENST00000415017 DNAJA1P31689 397 aaKnown RBP12□□□□□ -0.49
CNN3-203ENST00000415017 RFC3P40938 356 aa12□□□□□ -0.49
CNN3-203ENST00000415017 CLK1P49759 484 aaKnown RBP12□□□□□ -0.49
CNN3-203ENST00000415017 CTBP2P56545 445 aa12□□□□□ -0.49
CNN3-203ENST00000415017 PMP22Q01453 160 aa12□□□□□ -0.49
CNN3-203ENST00000415017 RCN1Q15293 331 aa12□□□□□ -0.49
CNN3-203ENST00000415017 SEC23BQ15437 767 aa12□□□□□ -0.49
CNN3-203ENST00000415017 CADM2Q8N3J6 435 aa12□□□□□ -0.49
CNN3-203ENST00000415017 LSM14AQ8ND56 463 aaKnown RBP12□□□□□ -0.49
CNN3-203ENST00000415017 OR6S1Q8NH40 331 aa12□□□□□ -0.49
CNN3-203ENST00000415017 ACOT11Q8WXI4 607 aaPredicted RBP12□□□□□ -0.49
CNN3-203ENST00000415017 JSRP1Q96MG2 331 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms