RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 GSX2Q9BZM3 304 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 BCO1Q9HAY6 547 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 GP6Q9HCN6 339 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 CTPS2Q9NRF8 586 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 SERINC1Q9NRX5 453 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 ACER3Q9NUN7 267 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 HAO1Q9UJM8 370 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 USF3Q68DE3 2245 aa13.79□□□□□ -0.2
ACTB-202ENST00000414620 MAP1AP78559 2803 aaPredicted RBP13.78□□□□□ -0.2
ACTB-202ENST00000414620 GOLGA8QA0A0J9YX86 632 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 GOLGA8OA6NCC3 632 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 GOLGA8NF8WBI6 632 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 SULT2B1O00204 365 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 DNAJA2O60884 412 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 LY6G6DO95868 133 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 AGR2O95994 175 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 HEXAP06865 529 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 KITP10721 976 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 CCNA2P20248 432 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 IL12AP29459 219 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 CDKN2CP42773 168 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 OR3A2P47893 321 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 PLAURQ03405 335 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 CHRNEQ04844 493 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 STK11Q15831 433 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 DPY19L1Q2PZI1 675 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 SYT14P1Q58G82 188 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 BHLHA15Q7RTS1 189 aaPredicted RBP13.78□□□□□ -0.2
ACTB-202ENST00000414620 ANKFN1Q8N957 763 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 FAM71CQ8NEG0 241 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 PNPT1Q8TCS8 783 aaKnown RBP13.78□□□□□ -0.2
ACTB-202ENST00000414620 ZG16BQ96DA0 208 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 HDHD5Q9BXW7 423 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 WDR55Q9H6Y2 383 aaPredicted RBP13.78□□□□□ -0.2
ACTB-202ENST00000414620 AIG1Q9NVV5 245 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 RAB21Q9UL25 225 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 LAMP3Q9UQV4 416 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 SLC35A3Q9Y2D2 325 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 RNF115Q9Y4L5 304 aa13.78□□□□□ -0.2
ACTB-202ENST00000414620 HMGN4O00479 90 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 SNUPNO95149 360 aaKnown RBP13.77□□□□□ -0.21
ACTB-202ENST00000414620 IGHV3-9P01782 118 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 GSNP06396 782 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 CD3EP07766 207 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 CR1P17927 2039 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 ITGADQ13349 1161 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 SYPL1Q16563 259 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 NCMAPQ5T1S8 102 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 OGFOD2Q6N063 350 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 PRSS57Q6UWY2 283 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 DNAJC14Q6Y2X3 702 aaPredicted RBP13.77□□□□□ -0.21
ACTB-202ENST00000414620 TMPPEQ6ZT21 453 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 ZNF611Q8N823 705 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 KBTBD8Q8NFY9 601 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 IGFBPL1Q8WX77 278 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 ARL5BQ96KC2 179 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 CCDC115Q96NT0 180 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 PANX1Q96RD7 426 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 BDH2Q9BUT1 245 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 CCDC106Q9BWC9 280 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 POTEKPQ9BYX7 375 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 OR11A1Q9GZK7 315 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 CXorf56Q9H5V9 222 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 POLE3Q9NRF9 147 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.77□□□□□ -0.21
ACTB-202ENST00000414620 BTNL2Q9UIR0 455 aa13.77□□□□□ -0.21
ACTB-202ENST00000414620 NF1P21359 2839 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 CCDC154A6NI56 674 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 AP3D1O14617 1153 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 ADAM11O75078 769 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 CNOT4O95628 575 aaKnown RBP13.76□□□□□ -0.21
ACTB-202ENST00000414620 CHRM4P08173 479 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 IGHV1-2P23083 117 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 EPHA3P29320 983 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 ATP5J2P56134 94 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 WDR4P57081 412 aaKnown RBP13.76□□□□□ -0.21
ACTB-202ENST00000414620 CSNK2A1P68400 391 aaPredicted RBP13.76□□□□□ -0.21
ACTB-202ENST00000414620 KCNJ10P78508 379 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 ABLIM2Q6H8Q1 611 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 ADAM5Q6NVV9 412 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 ZNF621Q6ZSS3 439 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 Q6ZT83 130 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 GRINAQ7Z429 371 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 ZNF100Q8IYN0 542 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 KIRREL3Q8IZU9 778 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 ARFGAP2Q8N6H7 521 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 LILRB1Q8NHL6 650 aaPredicted RBP13.76□□□□□ -0.21
ACTB-202ENST00000414620 SLC25A43Q8WUT9 341 aaPredicted RBP13.76□□□□□ -0.21
ACTB-202ENST00000414620 CNOT9Q92600 299 aaKnown RBP13.76□□□□□ -0.21
ACTB-202ENST00000414620 ZNF75CPQ92670 426 aaPredicted RBP13.76□□□□□ -0.21
ACTB-202ENST00000414620 OR52E6Q96RD3 313 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 SAP130Q9H0E3 1048 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 ESRP2Q9H6T0 727 aaKnown RBP13.76□□□□□ -0.21
ACTB-202ENST00000414620 CHRNA9Q9UGM1 479 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 SPIN1Q9Y657 262 aaPredicted RBP13.76□□□□□ -0.21
ACTB-202ENST00000414620 NAV3Q8IVL0 2385 aa13.76□□□□□ -0.21
ACTB-202ENST00000414620 TMEM120BA0PK00 339 aa13.75□□□□□ -0.21
ACTB-202ENST00000414620 PGRP06401 933 aa13.75□□□□□ -0.21
ACTB-202ENST00000414620 APOBEC1P41238 236 aaKnown RBP13.75□□□□□ -0.21
ACTB-202ENST00000414620 IDH2P48735 452 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms