RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 SF3B4Q15427 424 aaKnown RBP eCLIP15.37■□□□□ 0.054e-9■■■■□ 22.2
SCAMP4-204ENST00000414057 DECR1Q16698 335 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 C1orf185Q5T7R7 199 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 RNF220Q5VTB9 566 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 SHQ1Q6PI26 577 aaKnown RBP15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 NPSR1Q6W5P4 371 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 CARM1Q86X55 608 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 CCDC71Q8IV32 467 aaPredicted RBP15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 RPRMLQ8N4K4 120 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 CBR4Q8N4T8 237 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 NEIL3Q8TAT5 605 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 HSPBAP1Q96EW2 488 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 PIP5K1AQ99755 562 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 ANGPTL4Q9BY76 406 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 AMBRA1Q9C0C7 1298 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 HOXD1Q9GZZ0 328 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 ZNF443Q9Y2A4 671 aaPredicted RBP15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 CREBBPQ92793 2442 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 LRRC3CA6NJW4 275 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 TO15178 435 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 GLI4P10075 376 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 NID1P14543 1247 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 AQP4P55087 323 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 GPR68Q15743 365 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 NRF1Q16656 503 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 FLYWCH1Q4VC44 716 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 CCNJQ5T5M9 372 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 FIGNL1Q6PIW4 674 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 SLC35B4Q969S0 331 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 RDH12Q96NR8 316 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 ARHGDIGQ99819 225 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 UCK2Q9BZX2 261 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 GABARAPL1Q9H0R8 117 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 Q9H521 79 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 SPRR3Q9UBC9 169 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 TNFRSF10DQ9UBN6 386 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 RAB26Q9ULW5 256 aa15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 SAMHD1Q9Y3Z3 626 aaKnown RBP15.36■□□□□ 0.05
SCAMP4-204ENST00000414057 PRAMEF25A6NGN4 478 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 SOCS2O14508 198 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 PPM1BO75688 479 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 TRAPPC6AO75865 159 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 TOXO94900 526 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 ABCD3P28288 659 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 MSX1P28360 303 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 CASP3P42574 277 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 ALDH3A2P51648 485 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 SMIM11AP58511 58 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 TLE4Q04727 773 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 TAF11Q15544 211 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 OLIG3Q7RTU3 272 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 NUP54Q7Z3B4 507 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 TSEN54Q7Z6J9 526 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 CMIPQ8IY22 773 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 TMEM41AQ96HV5 264 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 RBM4BQ9BQ04 359 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 RBM4Q9BWF3 364 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 POLR2J2Q9GZM3 115 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 QRSL1Q9H0R6 528 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 POLR2J3Q9H1A7 115 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 USE1Q9NZ43 259 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 FAM215AQ9Y5M1 114 aa15.35■□□□□ 0.05
SCAMP4-204ENST00000414057 NKX2-6A6NCS4 301 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 AHRRA9YTQ3 701 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 UGT2B17O75795 530 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 IL33O95760 270 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 IGFBP2P18065 325 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 TNFRSF1BP20333 461 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 ENDOUP21128 410 aaKnown RBP15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 RRM2P31350 389 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 IFNA8P32881 189 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 HMGA2P52926 109 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 EEF1A1P68104 462 aaKnown RBP15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 TFF3Q07654 80 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 EPS8Q12929 822 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 DAG1Q14118 895 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 ZNF141Q15928 474 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 SLC25A35Q3KQZ1 300 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 RIPPLY2Q5TAB7 128 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 RTL6Q6ICC9 239 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 SLC30A6Q6NXT4 461 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 TMEM81Q6P7N7 255 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 STK32CQ86UX6 486 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 VRK2Q86Y07 508 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 PM20D2Q8IYS1 436 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 GALNT4Q8N4A0 578 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 ZG16BQ96DA0 208 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 DTNBP1Q96EV8 351 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 SLC29A1Q99808 456 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 OSBPL11Q9BXB4 747 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 NXF5Q9H1B4 397 aaKnown RBP15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 SLC6A15Q9H2J7 730 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 METTL7AQ9H8H3 244 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 MCCC2Q9HCC0 563 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 LRCH1Q9Y2L9 728 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 LYVE1Q9Y5Y7 322 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 MYO9AB2RTY4 2548 aa15.34■□□□□ 0.05
SCAMP4-204ENST00000414057 PCNX1Q96RV3 2341 aa15.33■□□□□ 0.05
SCAMP4-204ENST00000414057 A0A0G2JNJ9 132 aa15.33■□□□□ 0.05
SCAMP4-204ENST00000414057 HSPB2A8KAH6 182 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms