RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 FAM74A1Q5RGS3 127 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 OR5AK2Q8NH90 309 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 KLK6Q92876 244 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 NPAS1Q99742 590 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 KDM4EB2RXH2 506 aaPredicted RBP12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 E9PI62 339 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 MVDP53602 400 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 UBE2IP63279 158 aaKnown RBP12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 ILF3Q12906 894 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 SFRP5Q5T4F7 317 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 GLT8D1Q68CQ7 371 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 SYT9Q86SS6 491 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 POMGNT2Q8NAT1 580 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 ACTRT3Q9BYD9 372 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 ZFP64Q9NPA5 681 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 TDP1Q9NUW8 608 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 SCML1Q9UN30 329 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 RAB19A4D1S5 217 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 MCRIP1C9JLW8 97 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 PSMD9O00233 223 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 YY2O15391 372 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 LEFTY1O75610 366 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 SLC2A10O95528 541 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 C1orf105O95561 183 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 RENP00797 406 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 CDK5Q00535 292 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 SGCGQ13326 291 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 PDE7AQ13946 482 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 IRF4Q15306 451 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 GLDNQ6ZMI3 551 aaPredicted RBP12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 KIAA0907Q7Z7F0 614 aaPredicted RBP12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 OR11H4Q8NGC9 324 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 SMG9Q9H0W8 520 aaKnown RBP12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 HRH4Q9H3N8 390 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 RXFP3Q9NSD7 469 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 GSKIPQ9P0R6 139 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 POLR1DQ9Y2S0 133 aa12.95□□□□□ -0.34
CLTCL1-201ENST00000412649 CFDP00746 253 aaPredicted RBP12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 PET100P0DJ07 73 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 CD70P32970 193 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 HOXA1P49639 335 aaPredicted RBP12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 RAB13P51153 203 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 HCCSP53701 268 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 LTBQ06643 244 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 RAB11BQ15907 218 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 FAAP20Q6NZ36 180 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 C19orf48Q6RUI8 117 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 ZBTB8AQ96BR9 441 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 BPIFA2Q96DR5 249 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 EVA1AQ9H8M9 152 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 NOX4Q9NPH5 578 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 TMEM82A0PJX8 343 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 C2orf74A8MZ97 194 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 SYT5O00445 386 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 AGPAT2O15120 278 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 IGLV3-27P01718 113 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 KLKB1P03952 638 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 GJA1P17302 382 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 GNALP38405 381 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 ARMC6Q6NXE6 501 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 OVCH2Q7RTZ1 564 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 CMTM4Q8IZR5 234 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 MMP21Q8N119 569 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 OR4D10Q8NGI6 311 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 RERGQ96A58 199 aaPredicted RBP12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 ZC3H12DA2A288 527 aaKnown RBP12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 ADH6P28332 368 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 MC3RP41968 323 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 NR0B1P51843 470 aaKnown RBP12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 RHEBQ15382 184 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 RTP2Q5QGT7 225 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 SDR9C7Q8NEX9 313 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 YIPF5Q969M3 257 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 SLC6A7Q99884 636 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 ANKRD19PQ9H560 264 aa12.94□□□□□ -0.34
CLTCL1-201ENST00000412649 ANTXRLA6NF34 631 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 TTLL8A6PVC2 850 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SURF4O15260 269 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 ATG12O94817 140 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 PCCBP05166 539 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 C1SP09871 688 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 MAOAP21397 527 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 UBE2MP61081 183 aaKnown RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 COL16A1Q07092 1604 aaPredicted RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 LRFN4Q6PJG9 635 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 USP50Q70EL3 339 aaPredicted RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 HSD11B1LQ7Z5J1 315 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SUSD6Q92537 303 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 OIP5O43482 229 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SLCO2B1O94956 709 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 AKR1C4P17516 323 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 PCBP3P57721 371 aaKnown RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SNTB1Q13884 538 aaKnown RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 TCEA2Q15560 299 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 RD3Q7Z3Z2 195 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 DEFB128Q7Z7B8 93 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 TMEM150AQ86TG1 271 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 NRROSQ86YC3 692 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF687Q8N1G0 1237 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms