RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PTNP21246 168 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 NT5EP21589 574 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 PYCR1P32322 319 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 NUDT1P36639 197 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 TNFRSF4P43489 277 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 KIR2DL1P43626 348 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-208ENST00000410011 SOX9P48436 509 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 SLC16A1P53985 500 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 ZSWIM7Q19AV6 140 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 CEP78Q5JTW2 689 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 ZBTB37Q5TC79 503 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 SLC22A10Q63ZE4 541 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 FIGLAQ6QHK4 219 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 KRT74Q7RTS7 529 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 OR5J2Q8NH18 312 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 ZCCHC10Q8TBK6 192 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 HGDQ93099 445 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 MARVELD3Q96A59 401 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 MED30Q96HR3 178 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 TRIM2Q9C040 744 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 ZFP64Q9NPA5 681 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 EMC3Q9P0I2 261 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 SPATA2Q9UM82 520 aa15.4■□□□□ 0.06
LIMS2-208ENST00000410011 TRAV27A0A087WT01 109 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 SMLR1H3BR10 107 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 ZNF749O43361 778 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 FGF17O60258 216 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 MRPL3P09001 348 aaKnown RBP15.39■□□□□ 0.05
LIMS2-208ENST00000410011 ANXA3P12429 323 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 ACVR1BP36896 505 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 SNRPD2P62316 118 aaKnown RBP15.39■□□□□ 0.05
LIMS2-208ENST00000410011 OR51A7Q8NH64 312 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 MKRN2Q9H000 416 aaKnown RBP15.39■□□□□ 0.05
LIMS2-208ENST00000410011 OR51J1Q9H342 316 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 FBRSQ9HAH7 460 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 SLCO1C1Q9NYB5 712 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 ELF5Q9UKW6 265 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-208ENST00000410011 TEX13CA0A0J9YWL9 993 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 A6NCN8 305 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 PPP1R3DO95685 299 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 CLUP10909 449 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 CDK5R1Q15078 307 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 LYPD4Q6UWN0 246 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 LYPD8Q6UX82 237 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 UNQ9370/PRO34162Q6UXP9 181 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 SLITRK4Q8IW52 837 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 YAF2Q8IY57 180 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 FAM109AQ8N4B1 249 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 OR11H7Q8NGC8 314 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 THAP4Q8WY91 577 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 OR1E3Q8WZA6 343 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 TNFRSF13CQ96RJ3 184 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 ZFYVE21Q9BQ24 234 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 TMEM168Q9H0V1 697 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 MCCC2Q9HCC0 563 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 TMEM74BQ9NUR3 256 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 CHRNA9Q9UGM1 479 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 SLC23A1Q9UHI7 598 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 C2orf16Q68DN1 1984 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 SCN3AQ9NY46 2000 aa15.39■□□□□ 0.05
LIMS2-208ENST00000410011 A0A1B0GVI7 797 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 LRRC72A6NJI9 287 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 LRRN3E7EW58 273 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 FLRT2O43155 660 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 ITGA10O75578 1167 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 TYRP1P17643 537 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 ATF1P18846 271 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 GABRA3P34903 492 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 ACAA2P42765 397 aaKnown RBP15.38■□□□□ 0.05
LIMS2-208ENST00000410011 GBX2P52951 348 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-208ENST00000410011 CDONQ4KMG0 1287 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 ESCO2Q56NI9 601 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 RPL22L1Q6P5R6 122 aaKnown RBP15.38■□□□□ 0.05
LIMS2-208ENST00000410011 BTN2A1Q7KYR7 527 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 ZNF655Q8N720 491 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-208ENST00000410011 OR5H6Q8NGV6 325 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 ZNF431Q8TF32 576 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-208ENST00000410011 BADQ92934 168 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 NECTIN4Q96NY8 510 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 CACNG6Q9BXT2 260 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 LRRN3Q9H3W5 708 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 KLHL1Q9NR64 748 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 FLRT3Q9NZU0 649 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 LAMA2P24043 3122 aaKnown RBP15.38■□□□□ 0.05
LIMS2-208ENST00000410011 TBC1D3DA0A087WVF3 549 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 TBC1D3IA0A087WXS9 549 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 A0A1B0GWA3 101 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 TBC1D3LB9A6J9 549 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 NOS1APO75052 506 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-208ENST00000410011 TBC1D3HP0C7X1 549 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 SRP9P49458 86 aaKnown RBP15.38■□□□□ 0.05
LIMS2-208ENST00000410011 ARPC4P59998 168 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 SIRPAP78324 504 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 NFATC4Q14934 902 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 TBC1D3CQ6IPX1 549 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 FIGNL1Q6PIW4 674 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 RPTNQ6XPR3 784 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 SSX6Q7RTT6 188 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 SIAH3Q8IW03 269 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 TBC1D3Q8IZP1 549 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms