RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 RPS4XP62701 263 aaKnown RBP13.08□□□□□ -0.32
CBX3-203ENST00000409747 FAM174BQ3ZCQ3 159 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 SPANXN4Q5MJ08 99 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 CEP85LQ5SZL2 805 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 NCMAPQ5T1S8 102 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 AP1ARQ63HQ0 302 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 OGFOD2Q6N063 350 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 TMPPEQ6ZT21 453 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 Q71RC1 249 aaPredicted RBP13.08□□□□□ -0.32
CBX3-203ENST00000409747 BHLHA15Q7RTS1 189 aaPredicted RBP13.08□□□□□ -0.32
CBX3-203ENST00000409747 GALNT5Q7Z7M9 940 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 FBXW5Q969U6 566 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 ZNF524Q96C55 264 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 CCDC115Q96NT0 180 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 PARD6BQ9BYG5 372 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 KCNK9Q9NPC2 374 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 EXOSC3Q9NQT5 275 aaKnown RBP13.08□□□□□ -0.32
CBX3-203ENST00000409747 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.08□□□□□ -0.32
CBX3-203ENST00000409747 BTNL2Q9UIR0 455 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 ZNF814B7Z6K7 855 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 CLOCKO15516 846 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 DNPH1O43598 174 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 FESP07332 822 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 CASP9P55211 416 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 ATP5J2P56134 94 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 PDK3Q15120 406 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 TSC22D1Q15714 1073 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 GPAT3Q53EU6 434 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 FRRS1Q6ZNA5 592 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 GRINAQ7Z429 371 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 ZNF100Q8IYN0 542 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 RAB8BQ92930 207 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 CHRNA9Q9UGM1 479 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 ING1Q9UK53 422 aaPredicted RBP13.08□□□□□ -0.32
CBX3-203ENST00000409747 LIPT1Q9Y234 373 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 NAV3Q8IVL0 2385 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 TRIM64A6NGJ6 449 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 TRIM64BA6NI03 449 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 SMAD7O15105 426 aaKnown RBP13.07□□□□□ -0.32
CBX3-203ENST00000409747 LY6G6DO95868 133 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 TFPIP10646 304 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 CLK1P49759 484 aaKnown RBP13.07□□□□□ -0.32
CBX3-203ENST00000409747 PHC1P78364 1004 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 MAPK14Q16539 360 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 TNFAIP8L3Q5GJ75 292 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 ABLIM2Q6H8Q1 611 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 OLIG3Q7RTU3 272 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 SPATA19Q7Z5L4 167 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 CMIPQ8IY22 773 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 CIARTQ8N365 385 aaPredicted RBP13.07□□□□□ -0.32
CBX3-203ENST00000409747 ARFGAP2Q8N6H7 521 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 RAB3IL1Q8TBN0 382 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 MUCL1Q96DR8 90 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 PANX1Q96RD7 426 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 PAIP2Q9BPZ3 127 aaKnown RBP13.07□□□□□ -0.32
CBX3-203ENST00000409747 CCDC106Q9BWC9 280 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 LAMP3Q9UQV4 416 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 HDGFL3Q9Y3E1 203 aa13.07□□□□□ -0.32
CBX3-203ENST00000409747 IGKV3D-15A0A087WSY6 115 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 PMS2P2O95744 297 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 COX5AP20674 150 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 HTR3AP46098 478 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 KCNJ10P78508 379 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 BST1Q10588 318 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 FUT5Q11128 374 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 GNA13Q14344 377 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 STK11Q15831 433 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 ETFDHQ16134 617 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 HHATQ5VTY9 493 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 MTDHQ86UE4 582 aaKnown RBP13.06□□□□□ -0.32
CBX3-203ENST00000409747 P2RY8Q86VZ1 359 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 PIGXQ8TBF5 258 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 PIWIL2Q8TC59 973 aaKnown RBP13.06□□□□□ -0.32
CBX3-203ENST00000409747 TRMT61AQ96FX7 289 aaKnown RBP13.06□□□□□ -0.32
CBX3-203ENST00000409747 TRNT1Q96Q11 434 aaKnown RBP13.06□□□□□ -0.32
CBX3-203ENST00000409747 ZNF300Q96RE9 604 aaPredicted RBP13.06□□□□□ -0.32
CBX3-203ENST00000409747 ZBTB18Q99592 522 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 AIG1Q9NVV5 245 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 PRSS50Q9UI38 385 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 RAB21Q9UL25 225 aa13.06□□□□□ -0.32
CBX3-203ENST00000409747 TRPC5OSA6NMA1 111 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 HMGN4O00479 90 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 GPR171O14626 319 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 LYZL6O75951 148 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 UQCRBP14927 111 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 GGT1P19440 569 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 RYKP34925 604 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 PPA1Q15181 289 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 TIMM23BQ5SRD1 257 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 GLB1L3Q8NCI6 653 aaPredicted RBP13.05□□□□□ -0.32
CBX3-203ENST00000409747 PMM1Q92871 262 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 CTPS2Q9NRF8 586 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 PNPOQ9NVS9 261 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 ABCA2Q9BZC7 2435 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 CCDC154A6NI56 674 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 PGRP06401 933 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 ALDOCP09972 364 aaKnown RBP13.05□□□□□ -0.32
CBX3-203ENST00000409747 CHRNEQ04844 493 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 BSPH1Q075Z2 132 aa13.05□□□□□ -0.32
CBX3-203ENST00000409747 MPP2Q14168 576 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms