RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 DEFB124Q8NES8 71 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 WDR83Q9BRX9 315 aaKnown RBP7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ATP13A2Q9NQ11 1180 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF816-ZNF321PA0A0X1KG74 233 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 NKX6-3A6NJ46 265 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 CENPBD1B2RD01 187 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 H0Y8X5 98 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 CYBAP13498 195 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 MTCP1P56278 107 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 CEACAM7Q14002 265 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 LTB4RQ15722 352 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 C17orf99Q6UX52 265 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF321PQ8N8H1 164 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 WDSUB1Q8N9V3 476 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 OR5W2Q8NH69 310 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 FKBP10Q96AY3 582 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 MRI1Q9BV20 369 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 SDHAF2Q9NX18 166 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 STEAP1Q9UHE8 339 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 LIPT1Q9Y234 373 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ANKRD61A6NGH8 418 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 M0R233 179 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 RNASE10Q5GAN6 216 aaKnown RBP7.87□□□□□ -1.15
SCN9A-203ENST00000409672 FAM26DQ5JW98 314 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 PODNL1Q6PEZ8 512 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 EPGNQ6UW88 154 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 LCTLQ6UWM7 567 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 TMEM178AQ8NBL3 297 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ABHD4Q8TB40 342 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 CCDC74AQ96AQ1 378 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 C4orf36Q96KX1 117 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 P2RY12Q9H244 342 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 MRPL22Q9NWU5 206 aaKnown RBP7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ACTR3BQ9P1U1 418 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 INTS6Q9UL03 887 aaKnown RBP7.87□□□□□ -1.15
SCN9A-203ENST00000409672 SLC22A1O15245 554 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 MPC1LP0DKB6 136 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 IDH3GP51553 393 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-203ENST00000409672 GPX6P59796 221 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 PPIAP62937 165 aaKnown RBP7.87□□□□□ -1.15
SCN9A-203ENST00000409672 PDLIM3Q53GG5 364 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-203ENST00000409672 NADSYN1Q6IA69 706 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF783Q6ZMS7 281 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 GDPD3Q7L5L3 318 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 PQLC3Q8N755 202 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ALG8Q9BVK2 526 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 TREM2Q9NZC2 230 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 CBLCQ9ULV8 474 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 PIAS2O75928 621 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 S1PR4O95977 384 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ICAM2P13598 275 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ENPP1P22413 925 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 CRABP1P29762 137 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 DCTP40126 519 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 NADK2Q4G0N4 442 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF684Q5T5D7 378 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 CRELD2Q6UXH1 353 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-203ENST00000409672 PBDC1Q9BVG4 233 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 NDRG3Q9UGV2 375 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ALOX12BO75342 701 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 HTN1P15515 57 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ADH6P28332 368 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 SLC14A1Q13336 389 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 CNN3Q15417 329 aaKnown RBP7.87□□□□□ -1.15
SCN9A-203ENST00000409672 SBSNQ6UWP8 590 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 BAIAP2L2Q6UXY1 529 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 LRRC57Q8N9N7 239 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 C15orf40Q8WUR7 153 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 TCTN2Q96GX1 697 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 TMEM9BQ9NQ34 198 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 OR2J3O76001 311 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 IGHG1P01857 330 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 ITGB7P26010 798 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 CXADRP78310 365 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 EXOSC2Q13868 293 aaKnown RBP7.87□□□□□ -1.15
SCN9A-203ENST00000409672 Q7L0L9 218 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 FAM83FQ8NEG4 500 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-203ENST00000409672 SLC39A7Q92504 469 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 RAB39BQ96DA2 213 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 EHFQ9NZC4 300 aa7.87□□□□□ -1.15
SCN9A-203ENST00000409672 SLIT2O94813 1529 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 GABARAPH6UMI1 98 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 J3KTA2 159 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 LINC01565O15544 149 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 GABARAPO95166 117 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 DRD2P14416 443 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 RAB3BP20337 219 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 FPR1P21462 350 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 HRH2P25021 359 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 PBX1P40424 430 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 TMBIM6P55061 237 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 BAXQ07812 192 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 LYPD8Q6UX82 237 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 C6orf15Q6UXA7 325 aaPredicted RBP7.86□□□□□ -1.15
SCN9A-203ENST00000409672 BMFQ96LC9 184 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 PTBP2Q9UKA9 531 aaKnown RBP7.86□□□□□ -1.15
SCN9A-203ENST00000409672 LRRC30A6NM36 301 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 NUDT19A8MXV4 375 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 ZNF587BE7ETH6 402 aa7.86□□□□□ -1.15
SCN9A-203ENST00000409672 LY86O95711 162 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms