RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 NMNAT3Q96T66 252 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 PTPN13Q12923 2485 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 MPDZO75970 2070 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 C17orf51A8MQB3 221 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 NDUFB2O95178 105 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 WISP3O95389 354 aaPredicted RBP10.49□□□□□ -0.73
SNX13-202ENST00000409604 ICAM2P13598 275 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 DAPP51397 102 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 EPHA4P54764 986 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 AGERQ15109 404 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 ZSWIM7Q19AV6 140 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 KLHL22Q53GT1 634 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 SAXO2Q658L1 398 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 UEVLDQ8IX04 471 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 GPR137CQ8N3F9 429 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 ZNF511Q8NB15 262 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 MCUBQ9NWR8 336 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 TMED7-TICAM2A0A0A6YYA0 188 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 C12orf71A8MTZ7 269 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 MAGEB3O15480 346 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 BMP2P12643 396 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 OSMP13725 252 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 ISXQ2M1V0 245 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 MPEG1Q2M385 716 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 NHSL2Q5HYW2 709 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 LRIF1Q5T3J3 769 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 OGFRL1Q5TC84 451 aaPredicted RBP10.49□□□□□ -0.73
SNX13-202ENST00000409604 HMBOX1Q6NT76 420 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 GRAMD2AQ8IUY3 354 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 DNAJC22Q8N4W6 341 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 DNAJA4Q8WW22 397 aaPredicted RBP10.49□□□□□ -0.73
SNX13-202ENST00000409604 C10orf90Q96M02 699 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 SEMA4CQ9C0C4 833 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 SLC35A3Q9Y2D2 325 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 TMED7Q9Y3B3 224 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 HEATR5BQ9P2D3 2071 aa10.49□□□□□ -0.73
SNX13-202ENST00000409604 VCANP13611 3396 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 PRAMEF25A6NGN4 478 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 ZNF99A8MXY4 864 aaPredicted RBP10.48□□□□□ -0.73
SNX13-202ENST00000409604 C8BP07358 591 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 CHMP24386 653 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 TSFMP43897 325 aaKnown RBP10.48□□□□□ -0.73
SNX13-202ENST00000409604 RAB15P59190 212 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 ADAM8P78325 824 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 LSM11P83369 360 aaKnown RBP eCLIP10.48□□□□□ -0.737e-19■■■■■ 81
SNX13-202ENST00000409604 EFR3AQ14156 821 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 TRIM16LQ309B1 348 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 BOLLQ8N9W6 283 aaKnown RBP10.48□□□□□ -0.73
SNX13-202ENST00000409604 C19orf18Q8NEA5 215 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 OR8J1Q8NGP2 316 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 RASD2Q96D21 266 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 Q96M85 177 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 NPLQ9BXD5 320 aaPredicted RBP10.48□□□□□ -0.73
SNX13-202ENST00000409604 PCOLCE2Q9UKZ9 415 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 A0A087WUU8 490 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 CD8B2A6NJW9 211 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 MED26O95402 600 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 PRR35P0CG20 571 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 CD8BP10966 210 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 ABCD3P28288 659 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 GIPRP48546 466 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 GBX2P52951 348 aaPredicted RBP10.48□□□□□ -0.73
SNX13-202ENST00000409604 VHLLQ6RSH7 139 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 BTN2A1Q7KYR7 527 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 TRILQ7L0X0 811 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 TMEM179BQ7Z7N9 219 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 RIMKLAQ8IXN7 391 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 KLHL36Q8N4N3 616 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 ANKK1Q8NFD2 765 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 CT55Q8WUE5 264 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 DDIT4LQ96D03 193 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 ZC3HAV1LQ96H79 300 aaKnown RBP10.48□□□□□ -0.73
SNX13-202ENST00000409604 B3GNT4Q9C0J1 378 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 CCL27Q9Y4X3 112 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 SZT2Q5T011 3432 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 A0A1W2PPW3 197 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 A6NIN4 97 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 EEF1E1-BLOC1S5C9J1V9 151 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 EEF1E1O43324 174 aaKnown RBP10.48□□□□□ -0.73
SNX13-202ENST00000409604 MPZL2O60487 215 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 PPM1BO75688 479 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 CSN2P05814 226 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 TFPTP0C1Z6 253 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 MTNR1AP48039 350 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 PCYT1AP49585 367 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 SCN1BQ07699 218 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 C17orf67Q0P5P2 114 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 INPP5JQ15735 1006 aaPredicted RBP10.48□□□□□ -0.73
SNX13-202ENST00000409604 PYDC2Q56P42 97 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 TRIQKQ629K1 86 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 VASNQ6EMK4 673 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 WBP2NLQ6ICG8 309 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 ZER1Q7Z7L7 766 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 SPATA9Q9BWV2 254 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 SYT4Q9H2B2 425 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 SLC38A1Q9H2H9 487 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 TCF7L1Q9HCS4 588 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 NDUFA13Q9P0J0 144 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 GRIP1Q9Y3R0 1128 aa10.48□□□□□ -0.73
SNX13-202ENST00000409604 TRABD2BA6NFA1 517 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms