RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 GFRA1P56159 465 aa30.09■■■□□ 2.41
CSNK1E-204ENST00000403904 FOXD4Q12950 439 aaPredicted RBP30.09■■■□□ 2.41
CSNK1E-204ENST00000403904 ALG10BQ5I7T1 473 aa30.09■■■□□ 2.41
CSNK1E-204ENST00000403904 ULK3Q6PHR2 472 aa30.09■■■□□ 2.41
CSNK1E-204ENST00000403904 TRILQ7L0X0 811 aa30.09■■■□□ 2.41
CSNK1E-204ENST00000403904 NEIL3Q8TAT5 605 aa30.09■■■□□ 2.41
CSNK1E-204ENST00000403904 PRRC1Q96M27 445 aa30.09■■■□□ 2.41
CSNK1E-204ENST00000403904 CHID1Q9BWS9 393 aa30.09■■■□□ 2.41
CSNK1E-204ENST00000403904 AGPAT4Q9NRZ5 378 aa30.09■■■□□ 2.41
CSNK1E-204ENST00000403904 CCM2LQ9NUG4 571 aaPredicted RBP30.09■■■□□ 2.41
CSNK1E-204ENST00000403904 ZNF337Q9Y3M9 751 aa30.09■■■□□ 2.41
CSNK1E-204ENST00000403904 TRAPPC13A5PLN9 417 aa30.08■■■□□ 2.41
CSNK1E-204ENST00000403904 EFNA2O43921 213 aa30.08■■■□□ 2.41
CSNK1E-204ENST00000403904 MAGEA2P43356 314 aa30.08■■■□□ 2.41
CSNK1E-204ENST00000403904 HTR3AP46098 478 aa30.08■■■□□ 2.41
CSNK1E-204ENST00000403904 POLR2HP52434 150 aaKnown RBP30.08■■■□□ 2.41
CSNK1E-204ENST00000403904 DNAJA4Q8WW22 397 aaPredicted RBP30.08■■■□□ 2.41
CSNK1E-204ENST00000403904 GPR137Q96N19 417 aa30.08■■■□□ 2.41
CSNK1E-204ENST00000403904 RIMS3Q9UJD0 308 aa30.08■■■□□ 2.41
CSNK1E-204ENST00000403904 ENTPD5O75356 428 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 RHCEP18577 417 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 CCNA2P20248 432 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 FUT4P22083 530 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 APOBEC1P41238 236 aaKnown RBP30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 HSF1Q00613 529 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 PIWIL3Q7Z3Z3 882 aaKnown RBP30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 CYP4Z1Q86W10 505 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 ADGRG3Q86Y34 549 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 SLC41A3Q96GZ6 507 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 BARD1Q99728 777 aaKnown RBP30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 POLR2J2Q9GZM3 115 aaKnown RBP30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 POLR2J3Q9H1A7 115 aaKnown RBP30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 SLC7A7Q9UM01 511 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 PRSS23O95084 383 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 OR5F1O95221 314 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 GDF7Q7Z4P5 450 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 ATG4DQ86TL0 474 aaPredicted RBP30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 PLSCR2Q9NRY7 297 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 SELENONQ9NZV5 590 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 TNFRSF10DQ9UBN6 386 aa30.07■■■□□ 2.4
CSNK1E-204ENST00000403904 COL6A6A6NMZ7 2263 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 TMED7-TICAM2A0A0A6YYA0 188 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 H3BML4 177 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 SUSD5O60279 629 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 HCN1O60741 890 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 TDGF1P3P51864 188 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 AAGABQ6PD74 315 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 ATP6V1C2Q8NEY4 427 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 RELTQ969Z4 430 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 SLX1AQ9BQ83 275 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 FNDC11Q9BVV2 318 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 TMEM185BQ9H7F4 350 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 ACAD8Q9UKU7 415 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 TMED7Q9Y3B3 224 aa30.06■■■□□ 2.4
CSNK1E-204ENST00000403904 ZNHIT1O43257 154 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 FKBP6O75344 327 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 LYPD3O95274 346 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 PEPDP12955 493 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 CHMP24386 653 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 CXCR1P25024 350 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 SLC7A1P30825 629 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 STARP49675 285 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 PAPD5Q8NDF8 572 aaKnown RBP30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 CPT1CQ8TCG5 803 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 PYDC1Q8WXC3 89 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 SLC38A4Q969I6 547 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 DUS3LQ96G46 650 aaKnown RBP30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 PIP5K1AQ99755 562 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 SPRR3Q9UBC9 169 aa30.05■■■□□ 2.4
CSNK1E-204ENST00000403904 CHP2O43745 196 aa30.04■■■□□ 2.4
CSNK1E-204ENST00000403904 OPN1LWP04000 364 aa30.04■■■□□ 2.4
CSNK1E-204ENST00000403904 BMP7P18075 431 aa30.04■■■□□ 2.4
CSNK1E-204ENST00000403904 KRTCAP3Q53RY4 240 aa30.04■■■□□ 2.4
CSNK1E-204ENST00000403904 CHRNA9Q9UGM1 479 aa30.04■■■□□ 2.4
CSNK1E-204ENST00000403904 TESMINQ9Y4I5 508 aa30.04■■■□□ 2.4
CSNK1E-204ENST00000403904 MPDZO75970 2070 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 A0A1B0GTH9 108 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 A0A1B0GVC2 190 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 ELOA3DA6NLF2 546 aaPredicted RBP30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 PRB1P04280 392 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 HOXB6P17509 224 aaKnown RBP30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 ELK4P28324 431 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 IFNA8P32881 189 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 GCKP35557 465 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 ELOA3BQ3SY89 546 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 DCST1Q5T197 706 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 SWT1Q5T5J6 900 aaKnown RBP30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 OFCC1Q8IZS5 231 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 LILRA2Q8N149 483 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 ELOA3Q8NG57 546 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 SMPDL3BQ92485 455 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 ABTB1Q969K4 478 aaPredicted RBP30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 ZNF347Q96SE7 839 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 NMNAT1Q9HAN9 279 aaPredicted RBP30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 SERINC1Q9NRX5 453 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 AP4S1Q9Y587 144 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 TMEM72A0PK05 275 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 PNMTP11086 282 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 ST3GAL3Q11203 375 aa30.03■■■□□ 2.4
CSNK1E-204ENST00000403904 WDR88Q6ZMY6 472 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms