RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 LYNX1P0DP58 116 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 SDC1P18827 310 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 APEX1P27695 318 aaKnown RBP10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 GCAP28676 217 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 SERPINB4P48594 390 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 SESN3P58005 492 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 PLAURQ03405 335 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 SKP2Q13309 424 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 MLC1Q15049 377 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 PDLIM3Q53GG5 364 aaPredicted RBP10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 TSPO2Q5TGU0 170 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 DEF8Q6ZN54 512 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 C1orf229Q6ZS94 237 aaPredicted RBP10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 CARM1Q86X55 608 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 LINC01356Q8N9X3 169 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 OR2T11Q8NH01 316 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 SGMS2Q8NHU3 365 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 FAM76AQ8TAV0 307 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 JADE3Q92613 823 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 ZNF764Q96H86 408 aaPredicted RBP10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 THUMPD3Q9BV44 507 aaKnown RBP10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 PIGUQ9H490 435 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 PLK3Q9H4B4 646 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 METTL17Q9H7H0 456 aaPredicted RBP10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 FKRPQ9H9S5 495 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 HHATLQ9HCP6 504 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 MID1IP1Q9NPA3 183 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 DUSP22Q9NRW4 184 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 GPATCH2Q9NW75 528 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 WBP11Q9Y2W2 641 aaKnown RBP10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 FKBP7Q9Y680 259 aa10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 KMT2CQ8NEZ4 4911 aaKnown RBP10.34□□□□□ -0.75
SPTLC1P3-201ENST00000403408 TMEM129A0AVI4 362 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 GTPBP1O00178 669 aaKnown RBP10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SULT2B1O00204 365 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 KLF11O14901 512 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 RSL1D1O76021 490 aaKnown RBP10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 INHBAP08476 426 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PGCP20142 388 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ATP5F1P24539 256 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CALCRP30988 508 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SERPINF1P36955 418 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ASMTP46597 345 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SLC16A1P53985 500 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ATP12AP54707 1039 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 LGALS3BPQ08380 585 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 RIN1Q13671 783 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 HIKESHIQ53FT3 197 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SYT14P1Q58G82 188 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 DCST2Q5T1A1 773 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 C3orf33Q6P1S2 294 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZCCHC12Q6PEW1 402 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SPATA19Q7Z5L4 167 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 MYPOPQ86VE0 399 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 C3orf56Q8N813 242 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZFAND2BQ8WV99 257 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TSSK3Q96PN8 268 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 STACQ99469 402 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 OR11A1Q9GZK7 315 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CDC42EP4Q9H3Q1 356 aaKnown RBP10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SERHL2Q9H4I8 314 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 REEP4Q9H6H4 257 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ACSS1Q9NUB1 689 aaPredicted RBP10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 EMCNQ9ULC0 261 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 UTP11Q9Y3A2 253 aaKnown RBP10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 DTNAQ9Y4J8 743 aa10.33□□□□□ -0.76
SPTLC1P3-201ENST00000403408 POC1B-GALNT4F8VUJ3 575 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 WNT9BO14905 357 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZNF264O43296 627 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 EIF4E2O60573 245 aaKnown RBP10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 AVPP01185 164 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 OR4A8P0C604 315 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 BMP4P12644 408 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 DAOP14920 347 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CCR4P51679 360 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 DVL1P1P54792 670 aaPredicted RBP10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SNRPD2P62316 118 aaKnown RBP10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ACTG1P63261 375 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 H3F3AP84243 136 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 HGFACQ04756 655 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 MERTKQ12866 999 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CCNIQ14094 377 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 IMPG1Q17R60 797 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ATP6AP1LQ52LC2 224 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PRR31Q5SQ13 230 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PDZK1Q5T2W1 519 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 OR7E24Q6IFN5 339 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SLC46A3Q7Z3Q1 461 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TMCO5AQ8N6Q1 288 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZNF614Q8N883 585 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZIC4Q8N9L1 334 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PPCDCQ96CD2 204 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 DOK1Q99704 481 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CCDC106Q9BWC9 280 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 LAT2Q9GZY6 243 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TUBB1Q9H4B7 451 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CTPS2Q9NRF8 586 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CA10Q9NS85 328 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZCCHC3Q9NUD5 404 aaKnown RBP10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 EMC3Q9P0I2 261 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms