RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 HLA-FP30511 346 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 SNU13P55769 128 aaKnown RBP9.18□□□□□ -0.94
HERC3-202ENST00000402738 SIM1P81133 766 aaPredicted RBP9.18□□□□□ -0.94
HERC3-202ENST00000402738 CORO6Q6QEF8 472 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 KIAA0907Q7Z7F0 614 aaPredicted RBP9.18□□□□□ -0.94
HERC3-202ENST00000402738 NPAS4Q8IUM7 802 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 OR51T1Q8NGJ9 327 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 YIPF5Q969M3 257 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 HCAR1Q9BXC0 346 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 RLIMQ9NVW2 624 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 BACE2Q9Y5Z0 518 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 MON2Q7Z3U7 1717 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 CCDC163A0A0D9SF12 145 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 MROH6A6NGR9 719 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 ZNF44P15621 663 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 NDUFS1P28331 727 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 MC3RP41968 323 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 CTSOP43234 321 aaPredicted RBP9.18□□□□□ -0.94
HERC3-202ENST00000402738 DGCR2P98153 550 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 RSU1Q15404 277 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 FAM74A1Q5RGS3 127 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 ZNF322Q6U7Q0 402 aaPredicted RBP9.18□□□□□ -0.94
HERC3-202ENST00000402738 C7orf61Q8IZ16 206 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 TRAM1L1Q8N609 369 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 BPIFA2Q96DR5 249 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 BORCS8Q96FH0 119 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 TSPAN10Q9H1Z9 355 aaPredicted RBP9.18□□□□□ -0.94
HERC3-202ENST00000402738 NELFAQ9H3P2 528 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 IL17CQ9P0M4 197 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 KIF25Q9UIL4 384 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 RHBDD3Q9Y3P4 386 aa9.18□□□□□ -0.94
HERC3-202ENST00000402738 COCHO43405 550 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 SYT7O43581 403 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 UGDHO60701 494 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 TAGLN2P37802 199 aaKnown RBP9.17□□□□□ -0.94
HERC3-202ENST00000402738 ZNF140P52738 457 aaPredicted RBP9.17□□□□□ -0.94
HERC3-202ENST00000402738 SEC13P55735 322 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 SGCAQ16586 387 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 CTSL3PQ5NE16 218 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 MANEALQ5VSG8 457 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 KCTD11Q693B1 232 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 CLEC9AQ6UXN8 241 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 MFSD4AQ8N468 514 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 NPRL2Q8WTW4 380 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 HOXB13Q92826 284 aaPredicted RBP9.17□□□□□ -0.94
HERC3-202ENST00000402738 G6PC3Q9BUM1 346 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 NRIP3Q9NQ35 241 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 DMRT3Q9NQL9 472 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 FAM86C1Q9NVL1 165 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 SPHK1Q9NYA1 384 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 ROBO1Q9Y6N7 1651 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 NPIPA5A0A0B4J1W7 369 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 A0A1W2PQ45 241 aaPredicted RBP9.17□□□□□ -0.94
HERC3-202ENST00000402738 A0A1W2PQY0 241 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 NPIPA7E9PJI5 369 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 CCSO14618 274 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 USP2O75604 605 aaPredicted RBP9.17□□□□□ -0.94
HERC3-202ENST00000402738 LEFTY1O75610 366 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 FGF19O95750 216 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 MBP02144 154 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 C8AP07357 584 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 NPIPA8P0DM63 369 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 OR13C7P0DN81 318 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 PIM1P11309 404 aaPredicted RBP9.17□□□□□ -0.94
HERC3-202ENST00000402738 ZP3P21754 424 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 CCNOP22674 350 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 RING1Q06587 406 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 SPOCK1Q08629 439 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 SH2D5Q6ZV89 423 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 ZNF695Q8IW36 515 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 TAAR8Q969N4 342 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 NEIL2Q969S2 332 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 ZNF566Q969W8 418 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 PGAP3Q96FM1 320 aaPredicted RBP9.17□□□□□ -0.94
HERC3-202ENST00000402738 PARP12Q9H0J9 701 aaKnown RBP9.17□□□□□ -0.94
HERC3-202ENST00000402738 ENY2Q9NPA8 101 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 PDLIM7Q9NR12 457 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 ICKQ9UPZ9 632 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 ZNF175Q9Y473 711 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 CITO14578 2027 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 ANTXRLA6NF34 631 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 M0QYG6 137 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 SOCS6O14544 535 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 NME1P15531 152 aaKnown RBP9.17□□□□□ -0.94
HERC3-202ENST00000402738 SELPP16109 830 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 G0S2P27469 103 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 TSPAN31Q12999 210 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 CLLU1Q5K131 121 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 ENTPD8Q5MY95 495 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 CARD17Q5XLA6 110 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 XAF1Q6GPH4 301 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 RPL22L1Q6P5R6 122 aaKnown RBP9.17□□□□□ -0.94
HERC3-202ENST00000402738 HIST2H3AQ71DI3 136 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 TMEM179BQ7Z7N9 219 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 VRK2Q86Y07 508 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 KHSRPQ92945 711 aaKnown RBP eCLIP9.17□□□□□ -0.948e-11■■■■■ 33.2
HERC3-202ENST00000402738 ZDHHC12Q96GR4 267 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 TGM7Q96PF1 710 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 OR11A1Q9GZK7 315 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 PATZ1Q9HBE1 687 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms