RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ATCAYQ86WG3 371 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 SLITRK4Q8IW52 837 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 SAMD12Q8N8I0 201 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 OR4N2Q8NGD1 307 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 STT3BQ8TCJ2 826 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 MROQ9BYG7 248 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 ULBP3Q9BZM4 244 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 CHST8Q9H2A9 424 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 ERVK13-1Q9NX77 482 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 TMEM14AQ9Y6G1 99 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 A0A075B6Q4 140 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 ERGP11308 486 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 RPS5P46782 204 aaKnown RBP12.97□□□□□ -0.33
SCAF4-202ENST00000399804 NXPH1P58417 271 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 CBFBQ13951 182 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 AKAP14Q86UN6 197 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 OR7G1Q8NGA0 311 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 NUDT22Q9BRQ3 303 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 KATNB1Q9BVA0 655 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 A4GNTQ9UNA3 340 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 RPH3AQ9Y2J0 694 aaPredicted RBP12.97□□□□□ -0.33
SCAF4-202ENST00000399804 TVP23AA6NH52 213 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 CHP2O43745 196 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 OR2T1O43869 369 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 AQP2P41181 271 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 RAB15P59190 212 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 ACTA2P62736 377 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 ACTG2P63267 376 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 EFR3AQ14156 821 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 SYT14P1Q58G82 188 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 KCTD18Q6PI47 426 aaPredicted RBP12.97□□□□□ -0.33
SCAF4-202ENST00000399804 LINGO2Q7L985 606 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 SLC35F3Q8IY50 421 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 OR2L13Q8N349 312 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 NKD1Q969G9 470 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 NXPE2Q96DL1 559 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 EVA1AQ9H8M9 152 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 PISDQ9UG56 409 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 DLGAP1O14490 977 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 RHAGQ02094 409 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 TLE3Q04726 772 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 CARD17Q5XLA6 110 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 LNX2Q8N448 690 aa12.97□□□□□ -0.33
SCAF4-202ENST00000399804 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.97□□□□□ -0.33
SCAF4-202ENST00000399804 IDSB3KWA1 339 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 DHFRP00374 187 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 PPP5CP53041 499 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 SNRPGP62308 76 aaKnown RBP12.96□□□□□ -0.33
SCAF4-202ENST00000399804 FOXK2Q01167 660 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 PLGLB1Q02325 96 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 HSD17B12Q53GQ0 312 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 UBQLNLQ8IYU4 475 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 SLC22A18ASQ8N1D0 253 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 MS4A15Q8N5U1 240 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 SYT14Q8NB59 555 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 CHST4Q8NCG5 386 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 SLC2A12Q8TD20 617 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 ZNF226Q9NYT6 803 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 PTPRDP23468 1912 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 ANKRD36A6QL64 1941 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 SIGLEC6O43699 453 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 LDOC1O95751 146 aaPredicted RBP12.96□□□□□ -0.33
SCAF4-202ENST00000399804 ATP1B1P05026 303 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 SLC6A9P48067 706 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 GP2P55259 537 aaKnown RBP12.96□□□□□ -0.33
SCAF4-202ENST00000399804 RELAQ04206 551 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 MLLT11Q13015 90 aaPredicted RBP12.96□□□□□ -0.33
SCAF4-202ENST00000399804 LRFN4Q6PJG9 635 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 SLC46A3Q7Z3Q1 461 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 TMPRSS9Q7Z410 1059 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 BCORP1Q8N888 145 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 CENPOQ9BU64 300 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 NXF5Q9H1B4 397 aaKnown RBP12.96□□□□□ -0.33
SCAF4-202ENST00000399804 NEK6Q9HC98 313 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 HPF1Q9NWY4 346 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 CCDC88CQ9P219 2028 aa12.96□□□□□ -0.33
SCAF4-202ENST00000399804 FUOMA2VDF0 154 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 C2orf72A6NCS6 295 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 NUDT21O43809 227 aaKnown RBP12.96□□□□□ -0.34
SCAF4-202ENST00000399804 CAPNS1P04632 268 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 PSKH1P11801 424 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 HSD11B1P28845 292 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 FOLR3P41439 243 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 RAB25P57735 213 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 UBE2IP63279 158 aaKnown RBP12.96□□□□□ -0.34
SCAF4-202ENST00000399804 SNTA1Q13424 505 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 CCDC92Q53HC0 331 aaPredicted RBP12.96□□□□□ -0.34
SCAF4-202ENST00000399804 C1orf94Q6P1W5 598 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 IL20RBQ6UXL0 311 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 MARCH3Q86UD3 253 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 MVB12AQ96EY5 273 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 PITX2Q99697 317 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 MED17Q9NVC6 651 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 GPR55Q9Y2T6 319 aaPredicted RBP12.96□□□□□ -0.34
SCAF4-202ENST00000399804 FKBP7Q9Y680 259 aa12.96□□□□□ -0.34
SCAF4-202ENST00000399804 RIF1Q5UIP0 2472 aaKnown RBP12.95□□□□□ -0.34
SCAF4-202ENST00000399804 TSC2P49815 1807 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 A0A1W2PPL8 197 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 SSNA1O43805 119 aa12.95□□□□□ -0.34
SCAF4-202ENST00000399804 SLC1A3P43003 542 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms