RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 HEXAP06865 529 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 RRASP10301 218 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 ADH5P11766 374 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 CR2P20023 1033 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 HRH2P25021 359 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 HSD11B1P28845 292 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 PTGER1P34995 402 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 PBX2P40425 430 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 ID1P41134 155 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 PCBP4P57723 403 aaKnown RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 CXCR4P61073 352 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 SCRN3Q0VDG4 424 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 GTF2H2Q13888 395 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 IL13RA2Q14627 380 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 C16orf72Q14CZ0 275 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 TAF1AQ15573 450 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 GPR107Q5VW38 600 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 GTF2H2CQ6P1K8 395 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 MOB3CQ70IA8 216 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 SETD3Q86TU7 594 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 RBM23Q86U06 439 aaKnown RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 TMEM25Q86YD3 366 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 SNX29P2Q8IUI4 249 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 GID4Q8IVV7 300 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 SFTPA1Q8IWL2 248 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 ADGRG5Q8IZF4 528 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 ST8SIA1Q92185 356 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 TMEM125Q96AQ2 219 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 L3HYPDHQ96EM0 354 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 IGSF21Q96ID5 467 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 SLC46A1Q96NT5 459 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 BBS4Q96RK4 519 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 C7orf50Q9BRJ6 194 aaKnown RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 ATG101Q9BSB4 218 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 RHNO1Q9BSD3 238 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 NPLQ9BXD5 320 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 RAB23Q9ULC3 237 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 B9D1Q9UPM9 204 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 MGAT4DA6NG13 374 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 E9PLN8 166 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 PRMT5O14744 637 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 SLC22A2O15244 555 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 PPM1DO15297 605 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 TAPBPO15533 448 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 LCMT2O60294 686 aaKnown RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 CLDN11O75508 207 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 CST1P01037 141 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 FTH1P02794 183 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 FUCA1P04066 466 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 SYPP08247 313 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 LHCGRP22888 699 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 TGM4P49221 684 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 TPMTP51580 245 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 RGS8P57771 180 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 RHAGQ02094 409 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 FPGSQ05932 587 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 DBPQ10586 325 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 TCF15Q12870 199 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 ACOX1Q15067 660 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 KCNMB1Q16558 191 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 YIF1BQ5BJH7 314 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 C19orf54Q5BKX5 351 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 KHDRBS2Q5VWX1 349 aaKnown RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 FAM90A2PQ658T7 463 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 SBSNQ6UWP8 590 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 FAM159AQ6UWV7 190 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 FAM214BQ7L5A3 538 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 HMGN2P46Q86SG4 172 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 ITIH5Q86UX2 942 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 C1orf87Q8N0U7 546 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 NATD1Q8N6N6 113 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 ASB11Q8WXH4 323 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 ST8SIA2Q92186 375 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 PIGCQ92535 297 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 UBE2FQ969M7 185 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 BIRC7Q96CA5 298 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 CCDC126Q96EE4 140 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 RMND5BQ96G75 393 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 VKORC1Q9BQB6 163 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 H2AFJQ9BTM1 129 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 RANBP3Q9H6Z4 567 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 EQTNQ9NQ60 294 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 SDR39U1Q9NRG7 319 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 ARL15Q9NXU5 204 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 IL17CQ9P0M4 197 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 SH3GLB1Q9Y371 365 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 RNF115Q9Y4L5 304 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 NINQ8N4C6 2090 aa5.72□□□□□ -1.49
TRAPPC13-202ENST00000399438 FRYLO94915 3013 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 FITM1A5D6W6 292 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 HEPACAM2A8MVW5 462 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 USP17L23D6RBM5 183 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 LRRN3E7EW58 273 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 GAPDHSO14556 408 aaPredicted RBP5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 CLOCKO15516 846 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 NKX2-8O15522 239 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 ESRRBO95718 433 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 GPIP06744 558 aa5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 RPS17P08708 135 aaKnown RBP5.71□□□□□ -1.49
TRAPPC13-202ENST00000399438 TNFRSF1BP20333 461 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms