RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 E2F1Q01094 437 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 SLC5A12Q1EHB4 618 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 RPS26P11Q5JNZ5 115 aaPredicted RBP9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 ZNF776Q68DI1 518 aaPredicted RBP9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 SFRP4Q6FHJ7 346 aaPredicted RBP9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 SFXN4Q6P4A7 337 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 HIST3H2AQ7L7L0 130 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 KLBQ86Z14 1044 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 CBARPQ8N350 705 aaPredicted RBP9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 PXT1Q8NFP0 134 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 GPR32P1Q8NGA4 272 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 OR4F15Q8NGB8 312 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 OR11G2Q8NGC1 345 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 SLC7A13Q8TCU3 470 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 HIST1H2ACQ93077 130 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 GLYATL1Q969I3 302 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 WDR89Q96FK6 387 aaPredicted RBP9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 GABRG3Q99928 467 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 BCL2L14Q9BZR8 327 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 ARL6Q9H0F7 186 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 OR10A4Q9H209 315 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 LRRN3Q9H3W5 708 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 C6orf106Q9H6K1 298 aaPredicted RBP9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 EQTNQ9NQ60 294 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 MED11Q9P086 117 aa9.4□□□□□ -0.9
HMGCLL1-205ENST00000398661 TRBV5-4A0A0C4DH59 114 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 A0A1B0GUH1 482 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 A0A1B0GW55 424 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 TSPAN11A1L157 253 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 SGCEO43556 437 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 EIF3GO75821 320 aaKnown RBP eCLIP9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 DUX4L2P0CJ85 424 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 DUX4L3P0CJ86 424 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 DUX4L4P0CJ87 422 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 DUX4L5P0CJ88 424 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 DUX4L6P0CJ89 424 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 DUX4L7P0CJ90 424 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 DRD1P21728 446 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 MMP11P24347 488 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 IRF8Q02556 426 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 DMWDQ09019 674 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 TSTA3Q13630 321 aaPredicted RBP9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 SERTAD2Q14140 314 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 IRF4Q15306 451 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 ZNF660Q6AZW8 331 aaPredicted RBP9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 PODNL1Q6PEZ8 512 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 HAGHLQ6PII5 290 aaPredicted RBP9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 SMARCD3Q6STE5 483 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 MACC1Q6ZN28 852 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 RBM45Q8IUH3 476 aaKnown RBP9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 GNPDA2Q8TDQ7 276 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 THAP4Q8WY91 577 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 PIGKQ92643 395 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 KAT2AQ92830 837 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 IFT27Q9BW83 186 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 GSN-AS1Q9NRJ2 163 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 DUX4Q9UBX2 424 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 EPHA6Q9UF33 1036 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 CLEC4AQ9UMR7 237 aa9.4□□□□□ -0.91
HMGCLL1-205ENST00000398661 GNG14A0A1W2PPG7 69 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 KDM4EB2RXH2 506 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 OR2A4O95047 310 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 ETHE1O95571 254 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 ECDO95905 644 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 CD22P20273 847 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 RORAP35398 523 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 RFC3P40938 356 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 SMIM11AP58511 58 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 NDUFA9Q16795 377 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 MICBQ29980 383 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 REEP3Q6NUK4 255 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 CD300LDQ6UXZ3 194 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 FAM83HQ6ZRV2 1179 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 TMEM17Q86X19 198 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 CFAP206Q8IYR0 622 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 HORMAD2Q8N7B1 307 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 POGLUT1Q8NBL1 392 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 OR6S1Q8NH40 331 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 OR52N1Q8NH53 320 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 CCL4L1Q8NHW4 92 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 TEX47Q8TBZ9 253 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 SFT2D1Q8WV19 159 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 LRIG1Q96JA1 1093 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 OR2A7Q96R45 310 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 GPR174Q9BXC1 333 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 TINAGL1Q9GZM7 467 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 BTBD1Q9H0C5 482 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 PRM3Q9NNZ6 103 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 NANSQ9NR45 359 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 ZDHHC3Q9NYG2 299 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 GPN3Q9UHW5 284 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 PLAGL1Q9UM63 463 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 A0A0G2JPF8 293 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 HMSDA8MTL9 139 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 HNRNPCL3B7ZW38 293 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 ACAA1P09110 424 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 HNRNPCL4P0DMR1 293 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 CBSLP0DN79 551 aa9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 PVALBP20472 110 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-205ENST00000398661 PSMB1P20618 241 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms