RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 WDSUB1Q8N9V3 476 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 SETD9Q8NE22 299 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 ELOA3Q8NG57 546 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 OR2M3Q8NG83 312 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 KCNE4Q8WWG9 221 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 ZNF524Q96C55 264 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 YTHDF1Q9BYJ9 559 aaKnown RBP12.37□□□□□ -0.43
MCF2L-209ENST00000397036 ING2Q9H160 280 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 PTGES2Q9H7Z7 377 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 SACM1LQ9NTJ5 587 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 IL20Q9NYY1 176 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 OSGIN1Q9UJX0 560 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 MED13Q9UHV7 2174 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 ZAR1LA6NP61 321 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 BCKDKO14874 412 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 TRIM3O75382 744 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-209ENST00000397036 P04436 131 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 GNAO1P09471 354 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 POU2F1P14859 743 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 WT1P19544 449 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-209ENST00000397036 CHMP24386 653 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 TACR3P29371 465 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 CD96P40200 585 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 APOBEC1P41238 236 aaKnown RBP12.37□□□□□ -0.43
MCF2L-209ENST00000397036 CDC20Q12834 499 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 TOMM34Q15785 309 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-209ENST00000397036 AGAP7PQ5VUJ5 663 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 BICRALQ6AI39 1079 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 TIGD3Q6B0B8 471 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 RPL13AP3Q6NVV1 102 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 ISLR2Q6UXK2 745 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 THAP5Q7Z6K1 395 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 C8orf59Q8N0T1 100 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-209ENST00000397036 OR6S1Q8NH40 331 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 STK35Q8TDR2 534 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 FBLIM1Q8WUP2 373 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 GATA6Q92908 595 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 BPIFA2Q96DR5 249 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 MRGPRX4Q96LA9 322 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 MUS81Q96NY9 551 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 AGAP4Q96P64 663 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 APOL4Q9BPW4 351 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 KLHDC3Q9BQ90 382 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 UTP23Q9BRU9 249 aaKnown RBP12.37□□□□□ -0.43
MCF2L-209ENST00000397036 RIBC2Q9H4K1 309 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 TIMMDC1Q9NPL8 285 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 UBAP1Q9NZ09 502 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 MED11Q9P086 117 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 CFAP54Q96N23 3096 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 IGKV1D-42A0A075B6H8 117 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 ARGFXA6NJG6 315 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 B4DXG7 233 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 NPIPB7O75200 414 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 CBR3O75828 277 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 NUDT14O95848 222 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 IFI30P13284 250 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 PRKCAP17252 672 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 CNR1P21554 472 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 CXCR1P25024 350 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 EPHA2P29317 976 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 GGT2P36268 569 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 EIF1P41567 113 aaKnown RBP12.36□□□□□ -0.43
MCF2L-209ENST00000397036 GIPRP48546 466 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 SLC9A3P48764 834 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 ISL1P61371 349 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 IL1RL1Q01638 556 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 TEKQ02763 1124 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 FOXD4Q12950 439 aaPredicted RBP12.36□□□□□ -0.43
MCF2L-209ENST00000397036 MFAP5Q13361 173 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 TUBA3CQ13748 450 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 PTGES3Q15185 160 aaKnown RBP12.36□□□□□ -0.43
MCF2L-209ENST00000397036 ANKDD1AQ495B1 522 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 GLYR1Q49A26 553 aaPredicted RBP12.36□□□□□ -0.43
MCF2L-209ENST00000397036 ATP1A1-AS1Q5TC04 95 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 KRT80Q6KB66 452 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 TUBA3EQ6PEY2 450 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 UGT2A3Q6UWM9 527 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 ADGRG3Q86Y34 549 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 PSD4Q8NDX1 1056 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 RNF217Q8TC41 542 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 TRUB1Q8WWH5 349 aaKnown RBP12.36□□□□□ -0.43
MCF2L-209ENST00000397036 HAS2Q92819 552 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 OSTF1Q92882 214 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 C1GALT1C1Q96EU7 318 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 DTNBP1Q96EV8 351 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 FAM46AQ96IP4 442 aaKnown RBP12.36□□□□□ -0.43
MCF2L-209ENST00000397036 CNBD2Q96M20 576 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 DSN1Q9H410 356 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 PNPLA3Q9NST1 481 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 MED17Q9NVC6 651 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 LRFN1Q9P244 771 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 MRPS18CQ9Y3D5 142 aaKnown RBP12.36□□□□□ -0.43
MCF2L-209ENST00000397036 GMPPBQ9Y5P6 360 aa12.36□□□□□ -0.43
MCF2L-209ENST00000397036 APC2O95996 2303 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 EFSO43281 561 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 ZNF208O43345 1280 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 PTP4A3O75365 173 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 CEACAM4O75871 244 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 NEURL1O76050 574 aa12.35□□□□□ -0.43
MCF2L-209ENST00000397036 RCBTB2O95199 551 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms