RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CPNE1Q99829 537 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 SHCBP1LQ9BZQ2 653 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 MMP27Q9H306 513 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 ICAM5Q9UMF0 924 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 GPC6Q9Y625 555 aaPredicted RBP11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 TTC36A6NLP5 189 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 SYCE1LA8MT33 242 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 KCNH1O95259 989 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 IFI6P09912 130 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 PRKCAP17252 672 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 ADRA2CP18825 462 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 POU3F1Q03052 451 aaPredicted RBP11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 GABPB1Q06547 395 aaPredicted RBP11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 IFT88Q13099 833 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 SELENBP1Q13228 472 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 ELFN2Q5R3F8 820 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 CBLN3Q6UW01 205 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 RHOUQ7L0Q8 258 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 CMC1Q7Z7K0 106 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 UBE2J2Q8N2K1 259 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 BPIFB2Q8N4F0 458 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 ELP4Q96EB1 424 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 ATP6V1G3Q96LB4 118 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 KATNB1Q9BVA0 655 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 C3orf14Q9HBI5 128 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 TMBIM4Q9HC24 238 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 SENP1Q9P0U3 644 aa11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 TNPO3Q9Y5L0 923 aaKnown RBP11.81□□□□□ -0.52
VCPKMT-201ENST00000395859 CCDC189A1A4V9 331 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 JUNP05412 331 aaKnown RBP11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 GFAPP14136 432 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 SSTR1P30872 391 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 SPRP35270 261 aaPredicted RBP11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 SLC16A1P53985 500 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 ZNHIT3Q15649 155 aaPredicted RBP11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 SGO1Q5FBB7 561 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 CEP85LQ5SZL2 805 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 C3orf62Q6ZUJ4 267 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 DOK3Q7L591 496 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 NUP37Q8NFH4 326 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 GPR119Q8TDV5 335 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 GPR78Q96P69 363 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 GLIPR2Q9H4G4 154 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 ZNF442Q9H7R0 627 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 ZMAT3Q9HA38 289 aaKnown RBP11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 GIMAP4Q9NUV9 329 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 TAS2R7Q9NYW3 318 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 TREM2Q9NZC2 230 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 EMC3Q9P0I2 261 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 CRNNQ9UBG3 495 aaPredicted RBP11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 OPN4Q9UHM6 478 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 NOSIPQ9Y314 301 aaKnown RBP11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 MMP24Q9Y5R2 645 aa11.8□□□□□ -0.52
VCPKMT-201ENST00000395859 DNAJC9-AS1A6NH13 148 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 FAM159BA6NKW6 160 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 hCG_2039718K7EN88 272 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 PRSS23O95084 383 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 ESRRBO95718 433 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 RNASE1P07998 156 aaKnown RBP11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 SAGP10523 405 aaPredicted RBP11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 SLC7A1P30825 629 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 LCN1P31025 176 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 STX2P32856 288 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 CCNG1P51959 295 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 PRPS1P60891 318 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 HGFACQ04756 655 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 SRSF4Q08170 494 aaKnown RBP11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 NAB1Q13506 487 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 ADRM1Q16186 407 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 EXOSC6Q5RKV6 272 aaKnown RBP11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 GRTP1Q5TC63 336 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 ATP6V1C2Q8NEY4 427 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 OR4F6Q8NGB9 312 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 FAM76AQ8TAV0 307 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 C16orf78Q8WTQ4 265 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 TAF15Q92804 592 aaKnown RBP eCLIP11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 NSUN5Q96P11 429 aaKnown RBP11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 SLC38A2Q96QD8 506 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 ELOVL6Q9H5J4 265 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 SLC52A3Q9NQ40 469 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 UBQLN4Q9NRR5 601 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 DDX18Q9NVP1 670 aaKnown RBP11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 NINJ2Q9NZG7 142 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 VPS29Q9UBQ0 182 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 LGALS13Q9UHV8 139 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 ZNF225Q9UK10 706 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 PCTPQ9UKL6 214 aa11.79□□□□□ -0.52
VCPKMT-201ENST00000395859 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 TCRBV9S1A1TA0A576 114 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 J3QLI3 93 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 KLF11O14901 512 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 KCNK2O95069 426 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 MDKP21741 143 aaPredicted RBP11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 CALCRP30988 508 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 GPR6P46095 362 aaPredicted RBP11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 DIO1P49895 249 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 P2RX1P51575 399 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 NCBP2P52298 156 aaKnown RBP eCLIP11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 SUMO3P55854 103 aaPredicted RBP11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 IL1RL1Q01638 556 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms