RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 LRRC3CA6NJW4 275 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 E9PQ18 207 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 G3V3Y1 287 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 RRP8O43159 456 aaKnown RBP13.72□□□□□ -0.21
PTPN20-206ENST00000395722 GMFGO60234 142 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 WISP1O95388 367 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 SNAP29O95721 258 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 NUDT14O95848 222 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 IFNGR2P38484 337 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 HTR3AP46098 478 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 GSSP48637 474 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 RAD23AP54725 363 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 CTBP2P56545 445 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 PRKCDQ05655 676 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 PLPPR5Q32ZL2 321 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 ARSKQ6UWY0 536 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 PRICKLE2Q7Z3G6 844 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 OR4K17Q8NGC6 315 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 MBOAT4Q96T53 435 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 GPA33Q99795 319 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 TMEM43Q9BTV4 400 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 SLC19A3Q9BZV2 496 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 MEPEQ9NQ76 525 aaPredicted RBP13.72□□□□□ -0.21
PTPN20-206ENST00000395722 KRT84Q9NSB2 600 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 POFUT2Q9Y2G5 429 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 NCOR2Q9Y618 2525 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 A0A087WZY1 265 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 K7ENP7 123 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 GNB5O14775 395 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 PIP5K1CO60331 668 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 IGF2P01344 180 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 DNASE1L1P49184 302 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 POLR2HP52434 150 aaKnown RBP13.72□□□□□ -0.21
PTPN20-206ENST00000395722 FOXO1Q12778 655 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 INO80CQ6PI98 192 aaPredicted RBP13.72□□□□□ -0.21
PTPN20-206ENST00000395722 OR1J4Q8NGS1 313 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 SMAD5Q99717 465 aaKnown RBP13.72□□□□□ -0.21
PTPN20-206ENST00000395722 GABARAPL3Q9BY60 117 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 PTGES2Q9H7Z7 377 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 PAPOLBQ9NRJ5 636 aaKnown RBP13.72□□□□□ -0.21
PTPN20-206ENST00000395722 REV1Q9UBZ9 1251 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 RAB26Q9ULW5 256 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 MED31Q9Y3C7 131 aa13.72□□□□□ -0.21
PTPN20-206ENST00000395722 URB1O60287 2271 aaKnown RBP13.71□□□□□ -0.21
PTPN20-206ENST00000395722 ELOA3DA6NLF2 546 aaPredicted RBP13.71□□□□□ -0.21
PTPN20-206ENST00000395722 NME2P1O60361 137 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 NME2P22392 152 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 FPR3P25089 353 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 MASP1P48740 699 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 ADARB1P78563 741 aaKnown RBP13.71□□□□□ -0.21
PTPN20-206ENST00000395722 COX10Q12887 443 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 ELOA3BQ3SY89 546 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 TTC33Q6PID6 262 aaPredicted RBP13.71□□□□□ -0.21
PTPN20-206ENST00000395722 LSRQ86X29 649 aaPredicted RBP13.71□□□□□ -0.21
PTPN20-206ENST00000395722 ADGRG3Q86Y34 549 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 ELOA3Q8NG57 546 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 PFN4Q8NHR9 129 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 GNPDA2Q8TDQ7 276 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 TFAP2CQ92754 450 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 GTPBP3Q969Y2 492 aaKnown RBP13.71□□□□□ -0.21
PTPN20-206ENST00000395722 SCMH1Q96GD3 660 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 MRGPRX4Q96LA9 322 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 FAM173AQ9BQD7 235 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 ADI1Q9BV57 179 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 UCK2Q9BZX2 261 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 TOR3AQ9H497 397 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 ZNF556Q9HAH1 456 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 TUBA8Q9NY65 449 aaPredicted RBP13.71□□□□□ -0.21
PTPN20-206ENST00000395722 TMEM5Q9Y2B1 443 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 C15orf41Q9Y2V0 281 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 ORC6Q9Y5N6 252 aa13.71□□□□□ -0.21
PTPN20-206ENST00000395722 HTR3EA5X5Y0 456 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 CBR3O75828 277 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 TP53P04637 393 aaPredicted RBP13.71□□□□□ -0.22
PTPN20-206ENST00000395722 SP1P08047 785 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 ZNF41P51814 821 aaPredicted RBP13.71□□□□□ -0.22
PTPN20-206ENST00000395722 MERTKQ12866 999 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 TSPAN31Q12999 210 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 KCNAB2Q13303 367 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 TMEM44Q2T9K0 475 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 BROXQ5VW32 411 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 SLC25A25Q6KCM7 469 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 KLHL17Q6TDP4 642 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 TMPRSS11FQ6ZWK6 438 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 RRM2BQ7LG56 351 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 GALNT5Q7Z7M9 940 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 OR2M7Q8NG81 312 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 RNF217Q8TC41 542 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 POC1BQ8TC44 478 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 NPAS1Q99742 590 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 KRCC1Q9NPI7 259 aaPredicted RBP13.71□□□□□ -0.22
PTPN20-206ENST00000395722 C20orf141Q9NUB4 165 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 PCDHGA9Q9Y5G4 932 aaKnown RBP13.71□□□□□ -0.22
PTPN20-206ENST00000395722 AP4B1Q9Y6B7 739 aa13.71□□□□□ -0.22
PTPN20-206ENST00000395722 TMED7-TICAM2A0A0A6YYA0 188 aa13.7□□□□□ -0.22
PTPN20-206ENST00000395722 PINLYPA6NC86 204 aa13.7□□□□□ -0.22
PTPN20-206ENST00000395722 H0YAE9 185 aa13.7□□□□□ -0.22
PTPN20-206ENST00000395722 NPIPB7O75200 414 aa13.7□□□□□ -0.22
PTPN20-206ENST00000395722 POU2F1P14859 743 aa13.7□□□□□ -0.22
PTPN20-206ENST00000395722 CDH2P19022 906 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms