RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SMARCD3Q6STE5 483 aa13.68□□□□□ -0.22
CCT4-201ENST00000394440 CACTIN-AS1Q8N1I8 211 aa13.68□□□□□ -0.22
CCT4-201ENST00000394440 ANKK1Q8NFD2 765 aa13.68□□□□□ -0.22
CCT4-201ENST00000394440 OR52L1Q8NGH7 329 aa13.68□□□□□ -0.22
CCT4-201ENST00000394440 ZFAND2BQ8WV99 257 aa13.68□□□□□ -0.22
CCT4-201ENST00000394440 TMEM80Q96HE8 168 aa13.68□□□□□ -0.22
CCT4-201ENST00000394440 TEX12Q9BXU0 123 aa13.68□□□□□ -0.22
CCT4-201ENST00000394440 SLC19A3Q9BZV2 496 aa13.68□□□□□ -0.22
CCT4-201ENST00000394440 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCT4-201ENST00000394440 LOC102723996A0A087X1L8 192 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 GTPBP1O00178 669 aaKnown RBP13.67□□□□□ -0.22
CCT4-201ENST00000394440 HCN1O60741 890 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 IGF2P01344 180 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 BMP7P18075 431 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 LIPAP38571 399 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 FAM199XQ6PEV8 388 aaPredicted RBP13.67□□□□□ -0.22
CCT4-201ENST00000394440 CYP4Z2PQ8N1L4 340 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 C19orf25Q9UFG5 118 aaPredicted RBP13.67□□□□□ -0.22
CCT4-201ENST00000394440 LSM2Q9Y333 95 aaKnown RBP13.67□□□□□ -0.22
CCT4-201ENST00000394440 TRAV27A0A087WT01 109 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 EIF4E2O60573 245 aaKnown RBP13.67□□□□□ -0.22
CCT4-201ENST00000394440 GFRA3O60609 400 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 CBFA2T3O75081 653 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 NADKO95544 446 aaPredicted RBP13.67□□□□□ -0.22
CCT4-201ENST00000394440 KLK3P07288 261 aaPredicted RBP13.67□□□□□ -0.22
CCT4-201ENST00000394440 DOC2BQ14184 412 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 TIGD6Q17RP2 521 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 C16orf47Q6ZP98 133 aaPredicted RBP13.67□□□□□ -0.22
CCT4-201ENST00000394440 ZNF367Q7RTV3 350 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 MARCH3Q86UD3 253 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 P2RY8Q86VZ1 359 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 SLC43A2Q8N370 569 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 C8orf44Q96CB5 159 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 DCUN1D5Q9BTE7 237 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 MCCC2Q9HCC0 563 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 DIMT1Q9UNQ2 313 aaKnown RBP13.67□□□□□ -0.22
CCT4-201ENST00000394440 NPFFR2Q9Y5X5 522 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 CACNA1HO95180 2353 aa13.67□□□□□ -0.22
CCT4-201ENST00000394440 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.66□□□□□ -0.22
CCT4-201ENST00000394440 PPM1BO75688 479 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 SLC2A10O95528 541 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 EVI2BP34910 448 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 SLC6A8P48029 635 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 CCR4P51679 360 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 NRG3P56975 720 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 SF3A2Q15428 464 aaKnown RBP13.66□□□□□ -0.22
CCT4-201ENST00000394440 TMEM44Q2T9K0 475 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 SLC46A3Q7Z3Q1 461 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 TMCO5AQ8N6Q1 288 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 OR52I1Q8NGK6 324 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 CMKLR1Q99788 373 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 TMEM43Q9BTV4 400 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 ULBP3Q9BZM4 244 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 FN3KQ9H479 309 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 C12orf10Q9HB07 376 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 HINT3Q9NQE9 182 aaKnown RBP13.66□□□□□ -0.22
CCT4-201ENST00000394440 SLC39A1Q9NY26 324 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 CPAMD8Q8IZJ3 1885 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 TRBV11-1A0A0K0K1C0 115 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 C17orf51A8MQB3 221 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 GNB5O14775 395 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 NDUFB5O43674 189 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 KLF7O75840 302 aaPredicted RBP13.66□□□□□ -0.22
CCT4-201ENST00000394440 UMODP07911 640 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 ZNF806P0C7X5 589 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 PNMTP11086 282 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 ENDOUP21128 410 aaKnown RBP13.66□□□□□ -0.22
CCT4-201ENST00000394440 NXNL2Q5VZ03 156 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 OAFQ86UD1 273 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 NAXDQ8IW45 347 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 OR51A7Q8NH64 312 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 RNF138Q8WVD3 245 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 LGALS12Q96DT0 336 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 SGTBQ96EQ0 304 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 PLEKHA8Q96JA3 519 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 OR5M11Q96RB7 305 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 TBL1XR1Q9BZK7 514 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 ADAM19Q9H013 955 aa13.66□□□□□ -0.22
CCT4-201ENST00000394440 FGF20Q9NP95 211 aaPredicted RBP13.66□□□□□ -0.22
CCT4-201ENST00000394440 HTR3EA5X5Y0 456 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 SNTNA6NMZ2 147 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 CD36P16671 472 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 NR4A1P22736 598 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 SLC1A3P43003 542 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 RAB40BQ12829 278 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 FAM69BQ5VUD6 431 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 MR1Q95460 341 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 SH3YL1Q96HL8 342 aaPredicted RBP13.65□□□□□ -0.22
CCT4-201ENST00000394440 TNFRSF13CQ96RJ3 184 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 ZBTB20Q9HC78 741 aaPredicted RBP13.65□□□□□ -0.22
CCT4-201ENST00000394440 CMC2Q9NRP2 79 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 WDFY3Q8IZQ1 3526 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 TEX51A0A1B0GUA7 166 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 HCRTR2O43614 444 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 ETV5P41161 510 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 NBL1P41271 181 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 MTNR1AP48039 350 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 SLC9A3P48764 834 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 CDH11P55287 796 aa13.65□□□□□ -0.22
CCT4-201ENST00000394440 FOXK2Q01167 660 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms