RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SPIN1Q9Y657 262 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-204ENST00000393546 M0QX08 132 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 TNFSF11O14788 317 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 SYNGR4O95473 234 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 TGM6O95932 706 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 TMIGD3P0DMS9 266 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 CTSSP25774 331 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 FKBP2P26885 142 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 HTR1EP28566 365 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 PCGF2P35227 344 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 ACAA2P42765 397 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 SLC1A3P43003 542 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 PCBP3P57721 371 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 CTU2Q2VPK5 515 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 GKAP1Q5VSY0 366 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 OR2A2Q6IF42 318 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 C3orf33Q6P1S2 294 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 PLXDC2Q6UX71 529 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 ARPINQ7Z6K5 226 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 PATL1Q86TB9 770 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 ARMC8Q8IUR7 673 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 ANKS4BQ8N8V4 417 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 ZNF845Q96IR2 970 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 DOCK7Q96N67 2140 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 CTPS2Q9NRF8 586 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 ZNF629Q9UEG4 869 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 SLC13A4Q9UKG4 626 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 KIAA1549Q9HCM3 1950 aa17.07■□□□□ 0.32
PDLIM7-204ENST00000393546 FAM90A27PA6NNH2 459 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 DVL2O14641 736 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 CXCL13O43927 109 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 SHOX2O60902 331 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 MFN2O95140 757 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 SHC1P29353 583 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 SLC7A1P30825 629 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 POLR2HP52434 150 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 PON3Q15166 354 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 EEF1A1P5Q5VTE0 462 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 WBP2NLQ6ICG8 309 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 PPP4R4Q6NUP7 873 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 ERICH5Q6P6B1 374 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 HACD2Q6Y1H2 254 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 LIX1LQ8IVB5 337 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 NAXEQ8NCW5 288 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 SLC25A43Q8WUT9 341 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 FIG4Q92562 907 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 INTS12Q96CB8 462 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 REXO5Q96IC2 774 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 ZNF583Q96ND8 569 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 GPATCH1Q9BRR8 931 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 UCK2Q9BZX2 261 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 CHST11Q9NPF2 352 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 KLHL28Q9NXS3 571 aa17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 MCTS1Q9ULC4 181 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 UTP20O75691 2785 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-204ENST00000393546 TPST1O60507 370 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 IL18BPO95998 194 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 FCGR2AP12318 317 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 PRG2P13727 222 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 BMP5P22003 454 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 TACR3P29371 465 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 OPRM1P35372 400 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 NUDT2P50583 147 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 ZNF136P52737 540 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 SLC25A35Q3KQZ1 300 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 SP5Q6BEB4 398 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 ADGRG3Q86Y34 549 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 CADM2Q8N3J6 435 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 FNDC9Q8TBE3 224 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 SLC26A7Q8TE54 656 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 ADAM19Q9H013 955 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 EVA1AQ9H8M9 152 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 CHRNA9Q9UGM1 479 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 HECTD1Q9ULT8 2610 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 MED12LQ86YW9 2145 aa17.05■□□□□ 0.32
PDLIM7-204ENST00000393546 FLNBO75369 2602 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 CACNA1CQ13936 2221 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 TMED7-TICAM2A0A0A6YYA0 188 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 NKX2-6A6NCS4 301 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 NDUFAB1O14561 156 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 FRS3O43559 492 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 GCM2O75603 506 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 CRHP06850 196 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 TFPIP10646 304 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 CCNA2P20248 432 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 CLK1P49759 484 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 MAP2K6P52564 334 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 DMTNQ08495 405 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 VEZF1Q14119 521 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 CCDC80Q76M96 950 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 SLC15A3Q8IY34 581 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 CCDC197Q8NCU1 140 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 OR5B2Q96R09 309 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 RSPO3Q9BXY4 272 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 CMTM6Q9NX76 183 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 OSGIN1Q9UJX0 560 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 TMED7Q9Y3B3 224 aa17.04■□□□□ 0.32
PDLIM7-204ENST00000393546 A0A1W2PNR3 127 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 CCT8L1PA6NM43 557 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 FAM220BPB1ANY3 271 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms