RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 CRB3Q9BUF7 120 aa16.04■□□□□ 0.16
RUFY1-203ENST00000393448 IFT27Q9BW83 186 aa16.04■□□□□ 0.16
RUFY1-203ENST00000393448 MED20Q9H944 212 aa16.04■□□□□ 0.16
RUFY1-203ENST00000393448 HINT3Q9NQE9 182 aaKnown RBP16.04■□□□□ 0.16
RUFY1-203ENST00000393448 A0A087WUJ7 227 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 SAGE2PA6NJ88 616 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 KDM4EB2RXH2 506 aaPredicted RBP16.03■□□□□ 0.16
RUFY1-203ENST00000393448 PTP4A3O75365 173 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 BCL10O95999 233 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 GADD45AP24522 165 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 ADH7P40394 386 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 RBM34P42696 430 aaKnown RBP16.03■□□□□ 0.16
RUFY1-203ENST00000393448 NCF4Q15080 339 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 GXYLT1Q4G148 440 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 PAPD4Q6PIY7 484 aaKnown RBP16.03■□□□□ 0.16
RUFY1-203ENST00000393448 CPOQ8IVL8 374 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 PRRG3Q9BZD7 231 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 RXFP3Q9NSD7 469 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 OR6C76A6NM76 312 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 SOCS6O14544 535 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 TO15178 435 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 HCRTR2O43614 444 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 CPNE3O75131 537 aaKnown RBP16.03■□□□□ 0.16
RUFY1-203ENST00000393448 HBQ1P09105 142 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 IL11RAQ14626 422 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 SOWAHCQ53LP3 525 aaPredicted RBP16.03■□□□□ 0.16
RUFY1-203ENST00000393448 AADACL4Q5VUY2 407 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 CYP4Z2PQ8N1L4 340 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 C9orf43Q8TAL5 461 aaPredicted RBP16.03■□□□□ 0.16
RUFY1-203ENST00000393448 NACC2Q96BF6 587 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 HSPBAP1Q96EW2 488 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 CRELD1Q96HD1 420 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 DEPDC7Q96QD5 511 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 MGLLQ99685 303 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 HCAR1Q9BXC0 346 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 MCCC2Q9HCC0 563 aa16.03■□□□□ 0.16
RUFY1-203ENST00000393448 LSM2Q9Y333 95 aaKnown RBP16.03■□□□□ 0.16
RUFY1-203ENST00000393448 IGKV1D-42A0A075B6H8 117 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 ZC3H12DA2A288 527 aaKnown RBP16.02■□□□□ 0.16
RUFY1-203ENST00000393448 CSO75390 466 aaKnown RBP16.02■□□□□ 0.16
RUFY1-203ENST00000393448 RCBTB2O95199 551 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 WISP1O95388 367 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 ETV5P41161 510 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 MTNR1AP48039 350 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 SLC9A3P48764 834 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 ETV1P50549 477 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 CDH11P55287 796 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 CLDN6P56747 220 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 TOMM34Q15785 309 aaPredicted RBP16.02■□□□□ 0.16
RUFY1-203ENST00000393448 PLBD1Q6P4A8 553 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 ZNF367Q7RTV3 350 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 SLC46A3Q7Z3Q1 461 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 IGFN1Q86VF2 1251 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 ZNF440Q8IYI8 595 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 C7orf57Q8NEG2 295 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 DNAJA4Q8WW22 397 aaPredicted RBP16.02■□□□□ 0.16
RUFY1-203ENST00000393448 TAPBPLQ9BX59 468 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 TEX12Q9BXU0 123 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 TBCCD1Q9NVR7 557 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 ERGIC3Q9Y282 383 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 FREM2Q5SZK8 3169 aa16.02■□□□□ 0.16
RUFY1-203ENST00000393448 WWP2O00308 870 aa16.02■□□□□ 0.15
RUFY1-203ENST00000393448 SCO2O43819 266 aa16.02■□□□□ 0.15
RUFY1-203ENST00000393448 PPP1R3DO95685 299 aa16.02■□□□□ 0.15
RUFY1-203ENST00000393448 RGS6P49758 472 aa16.02■□□□□ 0.15
RUFY1-203ENST00000393448 TSTQ16762 297 aaKnown RBP16.02■□□□□ 0.15
RUFY1-203ENST00000393448 WBP2NLQ6ICG8 309 aa16.02■□□□□ 0.15
RUFY1-203ENST00000393448 MRPL14Q6P1L8 145 aaKnown RBP16.02■□□□□ 0.15
RUFY1-203ENST00000393448 LNX2Q8N448 690 aa16.02■□□□□ 0.15
RUFY1-203ENST00000393448 OR4F15Q8NGB8 312 aa16.02■□□□□ 0.15
RUFY1-203ENST00000393448 SEMA4CQ9C0C4 833 aa16.02■□□□□ 0.15
RUFY1-203ENST00000393448 OR51E2Q9H255 320 aa16.02■□□□□ 0.15
RUFY1-203ENST00000393448 RNF167Q9H6Y7 350 aa16.02■□□□□ 0.15
RUFY1-203ENST00000393448 FAIMQ9NVQ4 179 aa16.02■□□□□ 0.15
RUFY1-203ENST00000393448 TRBV11-1A0A0K0K1C0 115 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 NDUFB5O43674 189 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 HCN1O60741 890 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 HMGN1P05114 100 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 SOX3P41225 446 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 FOXK2Q01167 660 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 CXXC5Q7LFL8 322 aaKnown RBP16.01■□□□□ 0.15
RUFY1-203ENST00000393448 CPEB2Q7Z5Q1 589 aaKnown RBP16.01■□□□□ 0.15
RUFY1-203ENST00000393448 ZNF563Q8TA94 476 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 DNAJA3Q96EY1 480 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 TBL1XR1Q9BZK7 514 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 DIMT1Q9UNQ2 313 aaKnown RBP16.01■□□□□ 0.15
RUFY1-203ENST00000393448 ELOA3DA6NLF2 546 aaPredicted RBP16.01■□□□□ 0.15
RUFY1-203ENST00000393448 AIREO43918 545 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 RAB36O95755 333 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 ONECUT2O95948 504 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 ACP1P24666 158 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 CD97P48960 835 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 TRA2AQ13595 282 aaKnown RBP eCLIP16.01■□□□□ 0.15
RUFY1-203ENST00000393448 CLPPQ16740 277 aaPredicted RBP16.01■□□□□ 0.15
RUFY1-203ENST00000393448 ELOA3BQ3SY89 546 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 POMZP3Q6PJE2 187 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 DBX2Q6ZNG2 339 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 ATG4DQ86TL0 474 aaPredicted RBP16.01■□□□□ 0.15
RUFY1-203ENST00000393448 NANOGP1Q8N7R0 232 aa16.01■□□□□ 0.15
RUFY1-203ENST00000393448 ELOA3Q8NG57 546 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms