RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 C19orf25Q9UFG5 118 aaPredicted RBP9.81□□□□□ -0.84
PDGFD-202ENST00000393158 PHF3Q92576 2039 aaKnown RBP9.81□□□□□ -0.84
PDGFD-202ENST00000393158 NSG1A0A0A6YYJ2 146 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 ZC3H12DA2A288 527 aaKnown RBP9.81□□□□□ -0.84
PDGFD-202ENST00000393158 LRRC3CA6NJW4 275 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 TRIM3O75382 744 aaPredicted RBP9.81□□□□□ -0.84
PDGFD-202ENST00000393158 UBL4AP11441 157 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 IGFBP5P24593 272 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 CDK5Q00535 292 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 NPRL3Q12980 569 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 EIPR1Q53HC9 387 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 SLC25A53Q5H9E4 307 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 P3H2Q8IVL5 708 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 SLC15A4Q8N697 577 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 CATSPER1Q8NEC5 780 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 DACT3Q96B18 629 aaPredicted RBP9.81□□□□□ -0.84
PDGFD-202ENST00000393158 SLC35A3Q9Y2D2 325 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 SLC9A8Q9Y2E8 581 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 VPS13CQ709C8 3753 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 LRRN3E7EW58 273 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 NKX2-8O15522 239 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 ATP6V1B1P15313 513 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 RGS8P57771 180 aaPredicted RBP9.81□□□□□ -0.84
PDGFD-202ENST00000393158 PSPHP78330 225 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 TMEM236Q5W0B7 351 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 LRRC75AQ8NAA5 344 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 ACOT11Q8WXI4 607 aaPredicted RBP9.81□□□□□ -0.84
PDGFD-202ENST00000393158 SIGLEC12Q96PQ1 595 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 UBQLN3Q9H347 655 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 AKAP7Q9P0M2 348 aaPredicted RBP9.81□□□□□ -0.84
PDGFD-202ENST00000393158 CSAG2Q9Y5P2 127 aa9.81□□□□□ -0.84
PDGFD-202ENST00000393158 TRAPPC13A5PLN9 417 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 M0R129 80 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 CSTAP01040 98 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 SERPINA7P05543 415 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 HPCAP84074 193 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 APOFQ13790 326 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 INAQ16352 499 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 C1QL3Q5VWW1 255 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 C12orf73Q69YU5 71 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 THSD4Q6ZMP0 1018 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 LIPHQ8WWY8 451 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 ANGPTL4Q9BY76 406 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 HOXD1Q9GZZ0 328 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 CDCP1Q9H5V8 836 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 EGLN3Q9H6Z9 239 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 CPNE5Q9HCH3 593 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 LOC100130705A0A1B0GUX0 176 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 TRABD2BA6NFA1 517 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 IGHEP01854 428 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 CD97P48960 835 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 PTGES3Q15185 160 aaKnown RBP9.8□□□□□ -0.84
PDGFD-202ENST00000393158 OR5M10Q6IEU7 315 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 TMPRSS11FQ6ZWK6 438 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 ADGRG3Q86Y34 549 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 NRMQ8IXM6 262 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 LRRC17Q8N6Y2 441 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 ZNF527Q8NB42 609 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 OR5M3Q8NGP4 307 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 OR4Q3Q8NH05 313 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 TTC9Q92623 222 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 FAM46AQ96IP4 442 aaKnown RBP9.8□□□□□ -0.84
PDGFD-202ENST00000393158 UBL7Q96S82 380 aaPredicted RBP9.8□□□□□ -0.84
PDGFD-202ENST00000393158 COQ7Q99807 217 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.8□□□□□ -0.84
PDGFD-202ENST00000393158 IL20Q9NYY1 176 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 SEC14L4Q9UDX3 406 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 CACNA1GO43497 2377 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 NOTOA8MTQ0 251 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 HS6ST1O60243 411 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 PRKCAP17252 672 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 ELK4P28324 431 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 B3GALT5-AS1P59052 145 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 KEAP1Q14145 624 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 PDK3Q15120 406 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 SIRT6Q8N6T7 355 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 GTPBP3Q969Y2 492 aaKnown RBP9.8□□□□□ -0.84
PDGFD-202ENST00000393158 MOGAT1Q96PD6 335 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 DDOQ99489 341 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 ZNF559Q9BR84 538 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 MCCC2Q9HCC0 563 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 FKBP14Q9NWM8 211 aa9.8□□□□□ -0.84
PDGFD-202ENST00000393158 PIEZO2Q9H5I5 2752 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 REM1O75628 298 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 CEACAM4O75871 244 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 TSPAN9O75954 239 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 CCNB2O95067 398 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 ADAP00813 363 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 IGF2P01344 180 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 P2RY4P51582 365 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 COL28A1Q2UY09 1125 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 PLPPR5Q32ZL2 321 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 NUP54Q7Z3B4 507 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 OR2M3Q8NG83 312 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 WIF1Q9Y5W5 379 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 FTCDNL1E5RQL4 147 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 BHLHE40O14503 412 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 CD63P08962 238 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 RPP38P78345 283 aaKnown RBP9.79□□□□□ -0.84
PDGFD-202ENST00000393158 MVKQ03426 396 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms