RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 CCR4P51679 360 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 RPS6KA3P51812 740 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 LSM11P83369 360 aaKnown RBP eCLIP12.37□□□□□ -0.43
PTN-202ENST00000393083 IL5RAQ01344 420 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 SKP2Q13309 424 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 EFR3AQ14156 821 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 C1orf94Q6P1W5 598 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 Q6ZPB1 254 aaPredicted RBP12.37□□□□□ -0.43
PTN-202ENST00000393083 ZER1Q7Z7L7 766 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 CADM2Q8N3J6 435 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 POGLUT1Q8NBL1 392 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 SLC22A8Q8TCC7 542 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 GNPDA2Q8TDQ7 276 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 APOL4Q9BPW4 351 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 PRSS27Q9BQR3 290 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 MFRPQ9BY79 579 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 TBL1XR1Q9BZK7 514 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 EXOSC3Q9NQT5 275 aaKnown RBP12.37□□□□□ -0.43
PTN-202ENST00000393083 MYOTQ9UBF9 498 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 RPS6KB2Q9UBS0 482 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 NDRG4Q9ULP0 352 aaKnown RBP12.37□□□□□ -0.43
PTN-202ENST00000393083 MYRFQ9Y2G1 1151 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 SPENQ96T58 3664 aaKnown RBP12.37□□□□□ -0.43
PTN-202ENST00000393083 COL6A6A6NMZ7 2263 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 PCNX3Q9H6A9 2034 aa12.37□□□□□ -0.43
PTN-202ENST00000393083 EML6Q6ZMW3 1958 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 SPTA1P02549 2419 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 ALG1L2C9J202 215 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 E9PQ18 207 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 CHP2O43745 196 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 SCO2O43819 266 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 ZNF354AO60765 605 aaPredicted RBP12.36□□□□□ -0.43
PTN-202ENST00000393083 SOX14O95416 240 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 F10P00742 488 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 OSMP13725 252 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 CD96P40200 585 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 ST13P50502 369 aaKnown RBP12.36□□□□□ -0.43
PTN-202ENST00000393083 TNFSF10P50591 281 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 NUP107P57740 925 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 ESRRGP62508 458 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 RPP38P78345 283 aaKnown RBP12.36□□□□□ -0.43
PTN-202ENST00000393083 ALDH6A1Q02252 535 aaKnown RBP12.36□□□□□ -0.43
PTN-202ENST00000393083 BLMHQ13867 455 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 ZNF468Q5VIY5 522 aaPredicted RBP12.36□□□□□ -0.43
PTN-202ENST00000393083 SLC6A19Q695T7 634 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 WDR88Q6ZMY6 472 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 MBOAT2Q6ZWT7 520 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 PRICKLE2Q7Z3G6 844 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 MEX3DQ86XN8 651 aaKnown RBP12.36□□□□□ -0.43
PTN-202ENST00000393083 NRMQ8IXM6 262 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 LSMEM1Q8N8F7 131 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 TEX19Q8NA77 164 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 Q8NA96 180 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 OR5M3Q8NGP4 307 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 FAM46AQ96IP4 442 aaKnown RBP12.36□□□□□ -0.43
PTN-202ENST00000393083 HRASLS5Q96KN8 279 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 KRCC1Q9NPI7 259 aaPredicted RBP12.36□□□□□ -0.43
PTN-202ENST00000393083 REV1Q9UBZ9 1251 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 B3GNT3Q9Y2A9 372 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 CARD8Q9Y2G2 431 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 CNTRLQ7Z7A1 2325 aa12.36□□□□□ -0.43
PTN-202ENST00000393083 OR5H15A6NDH6 313 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 CDK2AP1O14519 115 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 NDUFB5O43674 189 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 ITGA10O75578 1167 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 OR2J2O76002 312 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 SMIM18P0DKX4 95 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 GSTM3P21266 225 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 ELK4P28324 431 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 GGT2P36268 569 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 OMPP47874 163 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 TMED10P49755 219 aaKnown RBP12.35□□□□□ -0.43
PTN-202ENST00000393083 CRISP1P54107 249 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 FBXW4P57775 412 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 COPZ1P61923 177 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 ARG2P78540 354 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 CD47Q08722 323 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 TUBA3CQ13748 450 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 CTU2Q2VPK5 515 aaKnown RBP12.35□□□□□ -0.43
PTN-202ENST00000393083 PLEKHN1Q494U1 663 aaPredicted RBP12.35□□□□□ -0.43
PTN-202ENST00000393083 ALG10BQ5I7T1 473 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 TUBA3EQ6PEY2 450 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 MARCH3Q86UD3 253 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 ZNF227Q86WZ6 799 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 TMEM239Q8WW34 195 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 PNPLA2Q96AD5 504 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 SH3YL1Q96HL8 342 aaPredicted RBP12.35□□□□□ -0.43
PTN-202ENST00000393083 RTN4RQ9BZR6 473 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 LAT2Q9GZY6 243 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 SELENONQ9NZV5 590 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 CNIH4Q9P003 139 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 ABI3Q9P2A4 366 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 YARS2Q9Y2Z4 477 aaKnown RBP12.35□□□□□ -0.43
PTN-202ENST00000393083 HSPE1-MOB4S4R3N1 261 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 CFAP46Q8IYW2 2715 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 B8ZZF3 427 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 FADS1O60427 444 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 ANGPTL1O95841 491 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 LINGO3P0C6S8 592 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 NAGAP17050 411 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms