RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 KMOO15229 486 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 MLNRO43193 412 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 MPDU1O75352 247 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 SC5DO75845 299 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 WNT11O96014 354 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 CDK4P11802 303 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 CPN1P15169 458 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 APOBEC1P41238 236 aaKnown RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 MLLT10P55197 1068 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 RAB25P57735 213 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 RAB35Q15286 201 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 SLC35D3Q5M8T2 416 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 FAM92BQ6ZTR7 304 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 FAM57BQ71RH2 274 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 ZNF571Q7Z3V5 609 aaPredicted RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 C5orf24Q7Z6I8 188 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 RALGPS2Q86X27 583 aaPredicted RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 RNF113BQ8IZP6 322 aaKnown RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 UBL4BQ8N7F7 174 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 OR5L2Q8NGL0 311 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 LPAR1Q92633 364 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 SIGLEC10Q96LC7 697 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 CSPG4P5Q96PW8 444 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 ENKD1Q9H0I2 346 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 C5orf66Q9H5L9 145 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 INIPQ9NRY2 104 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 FADS3Q9Y5Q0 445 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 MMP24Q9Y5R2 645 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 LRPPRCP42704 1394 aaKnown RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 USP54Q70EL1 1684 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 FAM90A26D6RGX4 464 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 INPP4BO15327 924 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 BUB3O43684 328 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 AP2A1O95782 977 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 HOXC6P09630 235 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 NAA10P41227 235 aaPredicted RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 ACTR1BP42025 376 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 DAP3P51398 398 aaKnown RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 TAF10Q12962 218 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 GCKRQ14397 625 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 C5orf47Q569G3 176 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 C3orf62Q6ZUJ4 267 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 C10orf107Q8IVU9 208 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 ZNF473Q8WTR7 871 aaKnown RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 TM4SF19Q96DZ7 209 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 RAB34Q9BZG1 259 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 MRM3Q9HC36 420 aaKnown RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 MMP25Q9NPA2 562 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 MRPL17Q9NRX2 175 aaKnown RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 SDHAF2Q9NX18 166 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 RAB23Q9ULC3 237 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 VDAC3Q9Y277 283 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 C5orf42Q9H799 3197 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 E7EWF7 191 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 TFAP2AP05549 437 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 HTR1FP30939 366 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 AQP2P41181 271 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 RFX5P48382 616 aaPredicted RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 POU3F4P49335 361 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 SP3Q02447 781 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 GK3PQ14409 553 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 PDZD11Q5EBL8 140 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 YTHDF3Q7Z739 585 aaKnown RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 SERINC5Q86VE9 423 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 KIRREL3Q8IZU9 778 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 DHRSXQ8N5I4 330 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 TTC9BQ8N6N2 239 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 PQLC3Q8N755 202 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 LRRC75AQ8NAA5 344 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 TBCKQ8TEA7 893 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 FGF11Q92914 225 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 OR5B2Q96R09 309 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 ZNF251Q9BRH9 671 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 ESRP2Q9H6T0 727 aaKnown RBP3.21□□□□□ -1.9
XRN1-202ENST00000392981 UVRAGQ9P2Y5 699 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 INSL5Q9Y5Q6 135 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 FHAD1B1AJZ9 1412 aa3.21□□□□□ -1.9
XRN1-202ENST00000392981 TTC21AQ8NDW8 1320 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 TRAV8-7A0A075B6U6 113 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 GRID2IPA4D2P6 1211 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 TRABD2BA6NFA1 517 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 CCT8L1PA6NM43 557 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 MSH4O15457 936 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 NDUFS7O75251 213 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 NAGAP17050 411 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 ATP6V1B2P21281 511 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 CFL1P23528 166 aaKnown RBP3.2□□□□□ -1.9
XRN1-202ENST00000392981 GMPRP36959 345 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 SOX2P48431 317 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 PLP1P60201 277 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 VLDLRP98155 873 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 ATXN7L3Q14CW9 347 aaPredicted RBP3.2□□□□□ -1.9
XRN1-202ENST00000392981 POU2AF1Q16633 256 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 RFTN2Q52LD8 501 aaPredicted RBP3.2□□□□□ -1.9
XRN1-202ENST00000392981 CARD16Q5EG05 197 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 MBOAT1Q6ZNC8 495 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 PAQR9Q6ZVX9 377 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 GPR142Q7Z601 462 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 SLC51BQ86UW2 128 aa3.2□□□□□ -1.9
XRN1-202ENST00000392981 ZDHHC13Q8IUH4 622 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms