RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 EFNA2O43921 213 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 TPST2O60704 377 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 STAMBPO95630 424 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 PLA2G2AP14555 144 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 TNFRSF1BP20333 461 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 IL11P20809 199 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 FKBP2P26885 142 aaKnown RBP13.45□□□□□ -0.26
SUMO1-203ENST00000392246 HTR2AP28223 471 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 UQCRFS1P47985 274 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 MAP2K6P52564 334 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 CLDN18P56856 261 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 MS4A2Q01362 244 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 SRYQ05066 204 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 OR1Q1Q15612 314 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 NPTX1Q15818 432 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 EIF2S3LQ2VIR3 472 aaKnown RBP13.45□□□□□ -0.26
SUMO1-203ENST00000392246 IFI44LQ53G44 452 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 C3orf33Q6P1S2 294 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 POMZP3Q6PJE2 187 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 VTCN1Q7Z7D3 282 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 DHFR2Q86XF0 187 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 ADGRG3Q86Y34 549 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 DOLPP1Q86YN1 238 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 RBM45Q8IUH3 476 aaKnown RBP13.45□□□□□ -0.26
SUMO1-203ENST00000392246 ULK2Q8IYT8 1036 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 LILRA2Q8N149 483 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 MEIOBQ8N635 442 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 PRR7Q8TB68 274 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 DNAJA4Q8WW22 397 aaPredicted RBP13.45□□□□□ -0.26
SUMO1-203ENST00000392246 GEMIN6Q8WXD5 167 aaKnown RBP13.45□□□□□ -0.26
SUMO1-203ENST00000392246 SMPDL3BQ92485 455 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 CCDC124Q96CT7 223 aaKnown RBP13.45□□□□□ -0.26
SUMO1-203ENST00000392246 HSH2DQ96JZ2 352 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 PRR14Q9BWN1 585 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 CTPS2Q9NRF8 586 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 ALKBH4Q9NXW9 302 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 OSGIN1Q9UJX0 560 aa13.45□□□□□ -0.26
SUMO1-203ENST00000392246 SPIN1Q9Y657 262 aaPredicted RBP13.45□□□□□ -0.26
SUMO1-203ENST00000392246 TMED7-TICAM2A0A0A6YYA0 188 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 FIGNL2A6NMB9 653 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 AHRRA9YTQ3 701 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 WDR1O75083 606 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 STSP08842 583 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 HOXD4P09016 255 aaPredicted RBP13.44□□□□□ -0.26
SUMO1-203ENST00000392246 GABRA1P14867 456 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 OR1E2P47887 323 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 KCNC4Q03721 635 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 TRAP1Q12931 704 aaKnown RBP13.44□□□□□ -0.26
SUMO1-203ENST00000392246 SF3B4Q15427 424 aaKnown RBP eCLIP13.44□□□□□ -0.26
SUMO1-203ENST00000392246 C3AR1Q16581 482 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 MTX3Q5HYI7 312 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 EMC4Q5J8M3 183 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 ZNF585AQ6P3V2 769 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 ULK3Q6PHR2 472 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 UBQLNLQ8IYU4 475 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 ATP6V1C2Q8NEY4 427 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 C3orf49Q96BT1 292 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 TP63Q9H3D4 680 aaPredicted RBP13.44□□□□□ -0.26
SUMO1-203ENST00000392246 TMEM185BQ9H7F4 350 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 SELENONQ9NZV5 590 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 CHRNA9Q9UGM1 479 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 TMED7Q9Y3B3 224 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 TRGV8A0A0C4DH27 118 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 A0A1B0GWA3 101 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 H0Y3Z8 333 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 SEC14L5O43304 696 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 PRKD3O94806 890 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 OPN1LWP04000 364 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 CXCR1P25024 350 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 SFTPDP35247 375 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 PTGER4P35408 488 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 CA7P43166 264 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 SUCLG1P53597 346 aaKnown RBP13.44□□□□□ -0.26
SUMO1-203ENST00000392246 CLDN20P56880 219 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 RPS3AP61247 264 aaKnown RBP13.44□□□□□ -0.26
SUMO1-203ENST00000392246 TMEM176BQ3YBM2 270 aaPredicted RBP13.44□□□□□ -0.26
SUMO1-203ENST00000392246 ENTPD8Q5MY95 495 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 LCN8Q6JVE9 175 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 ZNF613Q6PF04 617 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 CYP2R1Q6VVX0 501 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 ESPNLQ6ZVH7 1005 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 GGNQ86UU5 652 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 ZPLD1Q8TCW7 415 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 SLC25A43Q8WUT9 341 aaPredicted RBP13.44□□□□□ -0.26
SUMO1-203ENST00000392246 PYURFQ96I23 114 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 LRGUKQ96M69 825 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 KLHL15Q96M94 604 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 POLR2J2Q9GZM3 115 aaKnown RBP13.44□□□□□ -0.26
SUMO1-203ENST00000392246 POLR2J3Q9H1A7 115 aaKnown RBP13.44□□□□□ -0.26
SUMO1-203ENST00000392246 C12orf10Q9HB07 376 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 TINAGQ9UJW2 476 aa13.44□□□□□ -0.26
SUMO1-203ENST00000392246 MPDZO75970 2070 aa13.43□□□□□ -0.26
SUMO1-203ENST00000392246 A0A0B4J2E0 115 aa13.43□□□□□ -0.26
SUMO1-203ENST00000392246 A0A1B0GX12 115 aa13.43□□□□□ -0.26
SUMO1-203ENST00000392246 CPSF4LA6NMK7 179 aaKnown RBP13.43□□□□□ -0.26
SUMO1-203ENST00000392246 J3QKU1 62 aa13.43□□□□□ -0.26
SUMO1-203ENST00000392246 ACOT8O14734 319 aa13.43□□□□□ -0.26
SUMO1-203ENST00000392246 ADAMDEC1O15204 470 aa13.43□□□□□ -0.26
SUMO1-203ENST00000392246 ZNF208O43345 1280 aa13.43□□□□□ -0.26
SUMO1-203ENST00000392246 IFNW1P05000 195 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms