RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PEX19P40855 299 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 ST13P50502 369 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 CCR4P51679 360 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 INSM1Q01101 510 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 CRYZQ08257 329 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 TMEM44Q2T9K0 475 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 SMARCD3Q6STE5 483 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 BCDIN3DQ7Z5W3 292 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 ATG4DQ86TL0 474 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 MARCH3Q86UD3 253 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 ANKRD13BQ86YJ7 626 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 SUMF1Q8NBK3 374 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 OR13C2Q8NGS9 318 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 CRELD1Q96HD1 420 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 CDC6Q99741 560 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZPBPQ9BS86 351 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 LIN28AQ9H9Z2 209 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 B3GALT1Q9Y5Z6 326 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZNF318Q5VUA4 2279 aa10.47□□□□□ -0.73
SMARCAL1-203ENST00000392128 HCRTR2O43614 444 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 MAN1A2O60476 641 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 KLF7O75840 302 aaPredicted RBP10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZFAND5O76080 213 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 NADKO95544 446 aaPredicted RBP10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 UMODP07911 640 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 ADORA3P0DMS8 318 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 PSMB9P28065 219 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 CDCP2Q5VXM1 449 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 RNLSQ5VYX0 342 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 LNX2Q8N448 690 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 GALNT6Q8NCL4 622 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 ANKK1Q8NFD2 765 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 YIPF6Q96EC8 236 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 SGTBQ96EQ0 304 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 TMEM80Q96HE8 168 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 PLEKHA8Q96JA3 519 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 BCL7BQ9BQE9 202 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 TMEM43Q9BTV4 400 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 MRPS18AQ9NVS2 196 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 IL20RAQ9UHF4 553 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 ENPP5Q9UJA9 477 aa10.46□□□□□ -0.73
SMARCAL1-203ENST00000392128 ELOA3DA6NLF2 546 aaPredicted RBP10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 CH25HO95992 272 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 CD63P08962 238 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 MST1P26927 711 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 ETV5P41161 510 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 SLC1A3P43003 542 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 SLC9A3P48764 834 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 LSAMPQ13449 338 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 FHL1Q13642 323 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 PCOLCEQ15113 449 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 ISXQ2M1V0 245 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 ELOA3BQ3SY89 546 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 SLC16A12Q6ZSM3 486 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 OAFQ86UD1 273 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 LSRQ86X29 649 aaPredicted RBP10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 MISPQ8IVT2 679 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 ELOA3Q8NG57 546 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 OR2Y1Q8NGV0 311 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 LIN37Q96GY3 246 aaPredicted RBP10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 GPN2Q9H9Y4 310 aaPredicted RBP10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 ZBTB20Q9HC78 741 aaPredicted RBP10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 BAIAP2Q9UQB8 552 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 GPR52Q9Y2T5 361 aa10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 PTRH2Q9Y3E5 179 aaKnown RBP10.46□□□□□ -0.74
SMARCAL1-203ENST00000392128 IGKV1D-42A0A075B6H8 117 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 TRAV27A0A087WT01 109 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 TEX51A0A1B0GUA7 166 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 IRGMA1A4Y4 181 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 ADAM10O14672 748 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 ZNF354AO60765 605 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 ATE1O95260 518 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 ADRA2AP08913 450 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 AADACL4Q5VUY2 407 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 THSD4Q6ZMP0 1018 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 C16orf47Q6ZP98 133 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 RTL4Q6ZR62 310 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 RAB11FIP2Q7L804 512 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 ZNF367Q7RTV3 350 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 LSM14AQ8ND56 463 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 OR5W2Q8NH69 310 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 ZNF563Q8TA94 476 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 ELP5Q8TE02 316 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 HGDQ93099 445 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 RFKQ969G6 155 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 SH3YL1Q96HL8 342 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 TAAR9Q96RI9 348 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 DDA1Q9BW61 102 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 ADAM19Q9H013 955 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 ENKD1Q9H0I2 346 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 ZNF700Q9H0M5 742 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 FN3KQ9H479 309 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 MYOTQ9UBF9 498 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 IGHV1-45A0A0A0MS14 117 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 WWP2O00308 870 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 GNB5O14775 395 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 STK17BO94768 372 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 GABARAPO95166 117 aa10.45□□□□□ -0.74
SMARCAL1-203ENST00000392128 PTHP01270 115 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms