RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 FUT10Q6P4F1 479 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PRSS54Q6PEW0 395 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 FIGLAQ6QHK4 219 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TBPL2Q6SJ96 375 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC22A25Q6T423 547 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TMCO3Q6UWJ1 677 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CCDC149Q6ZUS6 474 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 C11orf57Q6ZUT1 292 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TOM1L2Q6ZVM7 507 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TCF23Q7RTU1 214 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 COX8CQ7Z4L0 72 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 NET1Q7Z628 596 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PHLDB2Q86SQ0 1253 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TMPRSS11BQ86T26 416 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 DOLPP1Q86YN1 238 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MCEMP1Q8IX19 187 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TIGD4Q8IY51 512 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF101Q8IZC7 436 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SCYL3Q8IZE3 742 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF444Q8N0Y2 327 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 C1orf158Q8N1D5 194 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MUC15Q8N387 334 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZCCHC7Q8N3Z6 543 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF713Q8N859 430 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZIC4Q8N9L1 334 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CCDC63Q8NA47 563 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 Q8NAQ8 132 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SPATA5Q8NB90 893 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 OR51S1Q8NGJ8 323 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 OR4C13Q8NGP0 309 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 OR6Y1Q8NGX8 325 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 OR4F5Q8NH21 305 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 OR4X1Q8NH49 305 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 GOT1L1Q8NHS2 421 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SCAMP5Q8TAC9 235 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 FANK1Q8TC84 345 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 FNDC8Q8TC99 324 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 FBXO25Q8TCJ0 367 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ACTRT1Q8TDG2 376 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SMPDL3AQ92484 453 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 EXT2Q93063 718 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TM4SF18Q96CE8 201 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RMDN1Q96DB5 314 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TM4SF19Q96DZ7 209 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ELP4Q96EB1 424 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ELMOD3Q96FG2 381 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 LINC00526Q96FQ7 95 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TIMD4Q96H15 378 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RBM41Q96IZ5 413 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 KLHL15Q96M94 604 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZFP3Q96NJ6 502 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 OR52B2Q96RD2 323 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PANX2Q96RD6 677 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CPXM1Q96SM3 734 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RUFY1Q96T51 708 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 AMELYQ99218 206 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MCHR1Q99705 422 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 B9D2Q9BPU9 175 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 DESI2Q9BSY9 194 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PAGR1Q9BTK6 254 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TBCDQ9BTW9 1192 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 THUMPD3Q9BV44 507 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 APOL6Q9BWW8 343 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 GPR174Q9BXC1 333 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PORCNQ9H237 461 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SLKQ9H2G2 1235 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 LINC00597Q9H2U6 94 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MMP27Q9H306 513 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MUC13Q9H3R2 512 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM38AQ9H6F2 299 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TDRD3Q9H7E2 651 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PRKRIP1Q9H875 184 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RPF1Q9H9Y2 349 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 STARD7Q9NQZ5 370 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF302Q9NR11 478 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 GSN-AS1Q9NRJ2 163 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CCL28Q9NRJ3 127 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MRGBPQ9NV56 204 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ARHGEF38Q9NXL2 777 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SUN2Q9UH99 717 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CD84Q9UIB8 345 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RNF150Q9ULK6 438 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF490Q9ULM2 529 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ABT1Q9ULW3 272 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 NPIPA1Q9UND3 350 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 KCNK6Q9Y257 313 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 EIF3LQ9Y262 564 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MAB21L2Q9Y586 359 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MRPS18BQ9Y676 258 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 NIPBLQ6KC79 2804 aaeCLIP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MYO9BQ13459 2157 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MED12Q93074 2177 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RPRD2Q5VT52 1461 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CNTRLQ7Z7A1 2325 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SPATA31E1Q6ZUB1 1445 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ARFGEF3Q5TH69 2177 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 THSD7BQ9C0I4 1608 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SACSQ9NZJ4 4579 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 TTC21BQ7Z4L5 1316 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 LAMA4Q16363 1823 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms