RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CX3CR1P49238 355 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ARRB1P49407 418 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 SERPINH1P50454 418 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 KPNA2P52292 529 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 BIDP55957 195 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 RAP1BP61224 184 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 RPS11P62280 158 aaKnown RBP eCLIP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ESRRGP62508 458 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 RAP1AP62834 184 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 HMGCS1Q01581 520 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CHRNB3Q05901 458 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 REG3AQ06141 175 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 SCN1BQ07699 218 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF616Q08AN1 781 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 SYCNQ0VAF6 134 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF816Q0VGE8 651 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CDC20Q12834 499 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZP4Q12836 540 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 PTK6Q13882 451 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 PIGHQ14442 188 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 SLMAPQ14BN4 828 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 STXBP2Q15833 593 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 SLC39A12Q504Y0 691 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 AGKQ53H12 422 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 LRRC10Q5BKY1 277 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF789Q5FWF6 425 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 C1orf100Q5SVJ3 147 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 LIPNQ5VXI9 398 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ATL3Q6DD88 541 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 PVRIGQ6DKI7 326 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CTRB2Q6GPI1 263 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 LEG1Q6P5S2 330 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CFAP161Q6P656 301 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 TMIGD1Q6UXZ0 262 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF562Q6V9R5 426 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ACOT7LQ6ZUV0 252 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 C1orf186Q6ZWK4 172 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 BRINP3Q76B58 766 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 BHLHA15Q7RTS1 189 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 KRT74Q7RTS7 529 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 LRRC70Q7Z2Q7 622 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF571Q7Z3V5 609 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 NET1Q7Z628 596 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 HOOK3Q86VS8 718 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 AMZ2Q86W34 360 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 PAQR7Q86WK9 346 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 METTL23Q86XA0 190 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 SIAH3Q8IW03 269 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 RIMKLAQ8IXN7 391 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF679Q8IYX0 411 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CLYBLQ8N0X4 340 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZSCAN4Q8NAM6 433 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CCDC191Q8NCU4 936 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CCNYQ8ND76 341 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 C1orf64Q8NEQ6 169 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 OR7G3Q8NG95 312 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 OR51S1Q8NGJ8 323 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 OR9G1Q8NH87 305 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 WDR36Q8NI36 951 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 BRSK1Q8TDC3 778 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 PAQR8Q8TEZ7 354 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CORO2AQ92828 525 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 BCL2L2Q92843 193 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM45BQ96B21 275 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 DNAJC19Q96DA6 116 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 L3HYPDHQ96EM0 354 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CCDC51Q96ER9 411 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CFAP36Q96G28 342 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ELMO2Q96JJ3 720 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 FCRL1Q96LA6 429 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 OR5B2Q96R09 309 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 OR2A5Q96R48 311 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 HIST1H4GQ99525 98 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 DOK1Q99704 481 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 MCHR1Q99705 422 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 KLHDC3Q9BQ90 382 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 TIMM29Q9BSF4 260 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 NAT9Q9BTE0 207 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 MLPHQ9BV36 600 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 UTP14AQ9BVJ6 771 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF416Q9BWM5 594 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF717Q9BY31 904 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 NFKBIZQ9BYH8 718 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 DNTTIP1Q9H147 329 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 POLR3FQ9H1D9 316 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ALDH8A1Q9H2A2 487 aaPredicted RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 RNPEPL1Q9HAU8 725 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CCL28Q9NRJ3 127 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ANKEF1Q9NU02 776 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 UTP6Q9NYH9 597 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 NDUFA13Q9P0J0 144 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZNRD1Q9P1U0 126 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 DHCR7Q9UBM7 475 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 NARFQ9UHQ1 456 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF337Q9Y3M9 751 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 CHTOPQ9Y3Y2 248 aaKnown RBP0.07□□□□□ -2.4
SNORD28-201ENST00000384706 USP16Q9Y5T5 823 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 ALG6Q9Y672 507 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM14AQ9Y6G1 99 aa0.07□□□□□ -2.4
SNORD28-201ENST00000384706 V9GY05 133 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms