RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 AP3S2P59780 193 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 YPEL5P62699 121 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 PITPNAQ00169 270 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 OAFQ86UD1 273 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 VRK2Q86Y07 508 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 NRMQ8IXM6 262 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 ACBD7Q8N6N7 88 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 ZFAND1Q8TCF1 268 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 SYNPO2LQ9H987 977 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 ZNF226Q9NYT6 803 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 MYEF2Q9P2K5 600 aaKnown RBP17.56■□□□□ 0.4
CSPG5-202ENST00000383738 CCDC88CQ9P219 2028 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 YY2O15391 372 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 CELA2BP08218 269 aaPredicted RBP17.56■□□□□ 0.4
CSPG5-202ENST00000383738 SHC1P29353 583 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 PITPNBP48739 271 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 GFERP55789 205 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 PODNL1Q6PEZ8 512 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 ZNF615Q8N8J6 731 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 PROKR2Q8NFJ6 384 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 FGF21Q9NSA1 209 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 PIKFYVEQ9Y2I7 2098 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 PTPRFP10586 1907 aa17.56■□□□□ 0.4
CSPG5-202ENST00000383738 IGHV3-20A0A0C4DH32 117 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 EIF1AYO14602 144 aaKnown RBP17.55■□□□□ 0.4
CSPG5-202ENST00000383738 TOR1AO14656 332 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 IL32P24001 234 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 AKR1C2P52895 323 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 AKR1C1Q04828 323 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 CHRNEQ04844 493 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 GIMAP1Q8WWP7 306 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 CREB3L1Q96BA8 519 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 MS4A8Q9BY19 250 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 PCDHB16Q9NRJ7 776 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 RLFQ13129 1914 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 ZNF547Q8IVP9 402 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 SPAG16Q8N0X2 631 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 MRPL48Q96GC5 212 aaKnown RBP17.55■□□□□ 0.4
CSPG5-202ENST00000383738 DHRS9Q9BPW9 319 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.55■□□□□ 0.4
CSPG5-202ENST00000383738 SLC25A18Q9H1K4 315 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 OR52A5Q9H2C5 316 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 PRDM6Q9NQX0 595 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 EXOSC1Q9Y3B2 195 aaKnown RBP17.55■□□□□ 0.4
CSPG5-202ENST00000383738 A0A1W2PRQ8 180 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 GRXCR2A6NFK2 248 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 TMPRSS11DO60235 418 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 KCNJ13O60928 360 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 SNRPBP14678 240 aaKnown RBP17.55■□□□□ 0.4
CSPG5-202ENST00000383738 C3P1Q6ZMU1 363 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 KCTD9Q7L273 389 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 TRIM46Q7Z4K8 759 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 ZNF527Q8NB42 609 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 ZNF680Q8NEM1 530 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 OR52R1Q8NGF1 315 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 GAL3ST3Q96A11 431 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 VDAC3Q9Y277 283 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 NOP16Q9Y3C1 178 aaKnown RBP17.55■□□□□ 0.4
CSPG5-202ENST00000383738 ENTPD2Q9Y5L3 495 aa17.55■□□□□ 0.4
CSPG5-202ENST00000383738 PRKYO43930 277 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 ZNF432O94892 652 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 MEDAGQ5VYS4 303 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 NAXEQ8NCW5 288 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 SAMD8Q96LT4 415 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 CDX2Q99626 313 aaPredicted RBP17.54■□□□□ 0.4
CSPG5-202ENST00000383738 SRA1Q9HD15 236 aaKnown RBP17.54■□□□□ 0.4
CSPG5-202ENST00000383738 ATP13A2Q9NQ11 1180 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 RGPD4Q7Z3J3 1758 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 SCN2AQ99250 2005 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 A0A1W2PPL8 197 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 GAPDHSO14556 408 aaPredicted RBP17.54■□□□□ 0.4
CSPG5-202ENST00000383738 HRO43593 1189 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 GIMD1P0DJR0 217 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 PCGF2P35227 344 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 DPTQ07507 201 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 GDPGP1Q6ZNW5 385 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 ARMC10Q8N2F6 343 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 IL1AP01583 271 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 PCSK2P16519 638 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 M6PRP20645 277 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 F8A1P23610 371 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 TRAM2Q15035 370 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 LAIR1Q6GTX8 287 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 ZC3H10Q96K80 434 aaKnown RBP17.54■□□□□ 0.4
CSPG5-202ENST00000383738 OPALINQ96PE5 141 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 DDOQ99489 341 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 PPA2Q9H2U2 334 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 PIGUQ9H490 435 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 PISDQ9UG56 409 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 MTCH2Q9Y6C9 303 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 WDR90Q96KV7 1748 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 MBTPS2O43462 519 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 MAOAP21397 527 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 SOX18P35713 384 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 ETV5P41161 510 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 ETV1P50549 477 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 CLPPQ16740 277 aaPredicted RBP17.54■□□□□ 0.4
CSPG5-202ENST00000383738 FAM198BQ6UWH4 519 aa17.54■□□□□ 0.4
CSPG5-202ENST00000383738 DAZLQ92904 295 aaKnown RBP17.54■□□□□ 0.4
CSPG5-202ENST00000383738 LPAR4Q99677 370 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms