RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 A0A0G2JNG1 304 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 RPS10-NUDT3A0A1W2PQS6 291 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 KIR2DS3K7RE56 304 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 GABRPO00591 440 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 DVL2O14641 736 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 GCAP28676 217 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 GJA4P35212 333 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 PSMB10P40306 273 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 ETV6P41212 452 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 RPS10P46783 165 aaKnown RBP13.09□□□□□ -0.31
SNPH-201ENST00000381867 AFF3P51826 1226 aaKnown RBP13.09□□□□□ -0.31
SNPH-201ENST00000381867 ZNF140P52738 457 aaPredicted RBP13.09□□□□□ -0.31
SNPH-201ENST00000381867 MRPL58Q14197 206 aaKnown RBP13.09□□□□□ -0.31
SNPH-201ENST00000381867 KIR2DS5Q14953 304 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 C1orf53Q5VUE5 145 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 LCN10Q6JVE6 187 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 FAM180BQ6P0A1 224 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 SLC22A25Q6T423 547 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 TMEM130Q8N3G9 435 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 IL17RCQ8NAC3 791 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 DNAAF1Q8NEP3 725 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 SLC2A12Q8TD20 617 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 METTL2AQ96IZ6 378 aaKnown RBP13.09□□□□□ -0.31
SNPH-201ENST00000381867 APOOQ9BUR5 198 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 NTMT1Q9BV86 223 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 CLMPQ9H6B4 373 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 PLCXD1Q9NUJ7 323 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 A6NIZ1 184 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 TMX2-CTNND1H3BSU7 103 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 PEX14O75381 377 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 FUT1P19526 365 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 RAP1BP61224 184 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 RAP1AP62834 184 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 SORDQ00796 357 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 SELPLGQ14242 412 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 OPCMLQ14982 345 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 APOOLQ6UXV4 268 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 MEPCEQ7L2J0 689 aaKnown RBP13.09□□□□□ -0.31
SNPH-201ENST00000381867 PLPP6Q8IY26 295 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 OR51D1Q8NGF3 324 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 C3orf30Q96M34 536 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 ACPTQ9BZG2 426 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 PLEKHJ1Q9NW61 149 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 TESQ9UGI8 421 aaKnown RBP13.09□□□□□ -0.31
SNPH-201ENST00000381867 A6NIN4 97 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 ANKRD28O15084 1053 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 SERPINE2P07093 398 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 FAM69BQ5VUD6 431 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 ACOT11Q8WXI4 607 aaPredicted RBP13.09□□□□□ -0.31
SNPH-201ENST00000381867 KCTD12Q96CX2 325 aaKnown RBP13.09□□□□□ -0.31
SNPH-201ENST00000381867 ARL5BQ96KC2 179 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 ZNF681Q96N22 645 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 SLC38A1Q9H2H9 487 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 LRRC37AA6NMS7 1700 aa13.09□□□□□ -0.31
SNPH-201ENST00000381867 MED6O75586 246 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 PRDX3P30048 256 aaKnown RBP13.08□□□□□ -0.31
SNPH-201ENST00000381867 RPL34P49207 117 aaKnown RBP13.08□□□□□ -0.31
SNPH-201ENST00000381867 VEGFCP49767 419 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 CAV3P56539 151 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 RPL23AP62750 156 aaKnown RBP13.08□□□□□ -0.31
SNPH-201ENST00000381867 TDGQ13569 410 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 GRM7Q14831 915 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 PGGHGQ32M88 737 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 PGM2L1Q6PCE3 622 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 UNQ6126/PRO20091Q6UXV3 157 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 Q6ZNX1 250 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 GLB1L2Q8IW92 636 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 SERINC2Q96SA4 455 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 SMIM3Q9BZL3 60 aa13.08□□□□□ -0.31
SNPH-201ENST00000381867 HEMK1Q9Y5R4 338 aaPredicted RBP13.08□□□□□ -0.31
SNPH-201ENST00000381867 IGLV3-10A0A075B6K4 115 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 NPIPB15A6NHN6 443 aaPredicted RBP13.08□□□□□ -0.32
SNPH-201ENST00000381867 HLA-AP01891 365 aaKnown RBP13.08□□□□□ -0.32
SNPH-201ENST00000381867 MC3RP41968 323 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 CX3CR1P49238 355 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 ZNF91Q05481 1191 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 CLVS2Q5SYC1 327 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 STEAP3Q658P3 488 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 SPTSSAQ969W0 71 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 SLAMF9Q96A28 289 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 SNX18Q96RF0 628 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 RTP3Q9BQQ7 232 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 CNTNAP3Q9BZ76 1288 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 SLC25A31Q9H0C2 315 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 GPATCH2Q9NW75 528 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 C17orf113A0A1B0GUU1 675 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 LATO43561 262 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 RAD1O60671 282 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 SERPINA7P05543 415 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 SMN1Q16637 294 aaKnown RBP13.08□□□□□ -0.32
SNPH-201ENST00000381867 PIP5KL1Q5T9C9 394 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 CNTN4Q8IWV2 1026 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 OR6V1Q8N148 313 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 OR4D6Q8NGJ1 314 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 RPL3LQ92901 407 aaKnown RBP13.08□□□□□ -0.32
SNPH-201ENST00000381867 SGCZQ96LD1 299 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 INTS14Q96SY0 518 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 IL26Q9NPH9 171 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 LHX3Q9UBR4 397 aa13.08□□□□□ -0.32
SNPH-201ENST00000381867 RHBDD3Q9Y3P4 386 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms