RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SLC36A4Q6YBV0 504 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 OR6C4Q8NGE1 309 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 WDR36Q8NI36 951 aaKnown RBP13.17□□□□□ -0.3
CLCN4-201ENST00000380829 TEX47Q8TBZ9 253 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 UPRTQ96BW1 309 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 TRAF4Q9BUZ4 470 aaPredicted RBP13.17□□□□□ -0.3
CLCN4-201ENST00000380829 GTPBP2Q9BX10 602 aaKnown RBP13.17□□□□□ -0.3
CLCN4-201ENST00000380829 VPS13AQ96RL7 3174 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 CDHR4A6H8M9 788 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 WWP2O00308 870 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 NKX2-2O95096 273 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 TALDO1P37837 337 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 SMSP52788 366 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 PLAURQ03405 335 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 ZNF91Q05481 1191 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 SNAPC1Q16533 368 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 DECR1Q16698 335 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 PYDC2Q56P42 97 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 TMEM201Q5SNT2 666 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 RANBP3LQ86VV4 465 aaPredicted RBP13.17□□□□□ -0.3
CLCN4-201ENST00000380829 COMMD7Q86VX2 200 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 ZNF595Q8IYB9 648 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 OR51Q1Q8NH59 317 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 DNASE2BQ8WZ79 361 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 ZDHHC12Q96GR4 267 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 LRR1Q96L50 414 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 DGAT2Q96PD7 388 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 DCLRE1CQ96SD1 692 aaKnown RBP13.17□□□□□ -0.3
CLCN4-201ENST00000380829 TSSK6Q9BXA6 273 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 MIXL1Q9H2W2 232 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 ANKRD19PQ9H560 264 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 ERVMER34-1Q9H9K5 563 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 ING3Q9NXR8 418 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 IL20RAQ9UHF4 553 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 GPR52Q9Y2T5 361 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 SIT1Q9Y3P8 196 aa13.17□□□□□ -0.3
CLCN4-201ENST00000380829 ASXL3Q9C0F0 2248 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 LINC00862A6NCI5 91 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 CLDN4O14493 209 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 GNSP15586 552 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 PER3P56645 1201 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 PRAMEF17Q5VTA0 474 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 WDR88Q6ZMY6 472 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 ZNF367Q7RTV3 350 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 SLC25A45Q8N413 288 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 ZBTB44Q8NCP5 570 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 DACT3Q96B18 629 aaPredicted RBP13.16□□□□□ -0.3
CLCN4-201ENST00000380829 GUCD1Q96NT3 240 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 CDCA4Q9BXL8 241 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 POLDIP3Q9BY77 421 aaKnown RBP13.16□□□□□ -0.3
CLCN4-201ENST00000380829 RERGLQ9H628 205 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 NLKQ9UBE8 527 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 MALT1Q9UDY8 824 aa13.16□□□□□ -0.3
CLCN4-201ENST00000380829 IGHV1OR21-1A0A087WYE8 117 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 FABP12A6NFH5 140 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 CH25HO95992 272 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 AK1P00568 194 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 IGKV1D-16P01601 117 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 IFNA16P05015 189 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 TSPAN19P0C672 248 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 MSL3P1P0C860 447 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 CKMT1AP12532 417 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 CFL1P23528 166 aaKnown RBP13.15□□□□□ -0.3
CLCN4-201ENST00000380829 CD1CP29017 333 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 CFHR1Q03591 330 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 GALEQ14376 348 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 OR1Q1Q15612 314 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 ZNHIT3Q15649 155 aaPredicted RBP13.15□□□□□ -0.3
CLCN4-201ENST00000380829 SYT14P1Q58G82 188 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 TCTE1Q5JU00 501 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 SLC27A4Q6P1M0 643 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 TTLL10Q6ZVT0 673 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 MBOAT2Q6ZWT7 520 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 PHC2Q8IXK0 858 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 SLC35F3Q8IY50 421 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 GIMAP1Q8WWP7 306 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 DIRAS2Q96HU8 199 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 OPALINQ96PE5 141 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 CLEC2DQ9UHP7 191 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 ERVK-19Q9WJR5 959 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 TMEM150CB9EJG8 249 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 CDC42EP2O14613 210 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 SLC34A2O95436 690 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 IFI6P09912 130 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 PIPP12273 146 aaPredicted RBP13.15□□□□□ -0.3
CLCN4-201ENST00000380829 OR1D4P47884 311 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 RORCP51449 518 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 IGLV3-21P80748 117 aaPredicted RBP13.15□□□□□ -0.3
CLCN4-201ENST00000380829 TIMM50Q3ZCQ8 353 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 GARNL3Q5VVW2 1013 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 SLC30A6Q6NXT4 461 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 TEX261Q6UWH6 196 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 NPSR1Q6W5P4 371 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 RASSF6Q6ZTQ3 369 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 ATP6V1C2Q8NEY4 427 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 HOXB13Q92826 284 aaPredicted RBP13.15□□□□□ -0.3
CLCN4-201ENST00000380829 VSTM2LQ96N03 204 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 PRSS27Q9BQR3 290 aa13.15□□□□□ -0.3
CLCN4-201ENST00000380829 LMF2Q9BU23 707 aaKnown RBP13.15□□□□□ -0.3
CLCN4-201ENST00000380829 HHATLQ9HCP6 504 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms