RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 CAPN7Q9Y6W3 813 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF407Q9C0G0 2248 aa8.31□□□□□ -1.08
HMGN1-202ENST00000380747 NUP214P35658 2090 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-202ENST00000380747 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 GMNCA6NCL1 334 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 SLC22A20A6NK97 555 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 BBIP1A8MTZ0 92 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 C19orf84I3L1E1 186 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 FBP2O00757 339 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 AP3D1O14617 1153 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 DVL2O14641 736 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 TNFSF11O14788 317 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 MRASO14807 208 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 CXCL13O43927 109 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 CCDC22O60826 627 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 TGM6O95932 706 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 NID1P14543 1247 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 GPX2P18283 190 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 BMP5P22003 454 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 RPS4Y1P22090 263 aaKnown RBP8.3□□□□□ -1.08
HMGN1-202ENST00000380747 PSMA4P25789 261 aaKnown RBP8.3□□□□□ -1.08
HMGN1-202ENST00000380747 ELK4P28324 431 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 LSP1P33241 339 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 SFTPDP35247 375 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 TIMP3P35625 211 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 SLC6A8P48029 635 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 SESN3P58005 492 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 MTPNP58546 118 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 RAC1P63000 192 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 CDK6Q00534 326 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 MERTKQ12866 999 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 LARS2Q15031 903 aaKnown RBP8.3□□□□□ -1.08
HMGN1-202ENST00000380747 PON3Q15166 354 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 LIN52Q52LA3 116 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF311Q5JNZ3 666 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 PDSS1Q5T2R2 415 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 MRPL2Q5T653 305 aaKnown RBP8.3□□□□□ -1.08
HMGN1-202ENST00000380747 REP15Q6BDI9 236 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 CPLX4Q7Z7G2 160 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 ADGRE4PQ86SQ3 457 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 GGNQ86UU5 652 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 DPP10Q8N608 796 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 OR2V1Q8NHB1 315 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 BBS10Q8TAM1 723 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 TMEM234Q8WY98 164 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 FIG4Q92562 907 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF524Q96C55 264 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 INTS12Q96CB8 462 aaKnown RBP8.3□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF845Q96IR2 970 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-202ENST00000380747 MRGPRX4Q96LA9 322 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 KLHL15Q96M94 604 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 ANKRD27Q96NW4 1050 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 CGREF1Q99674 301 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 PRRG4Q9BZD6 226 aa8.3□□□□□ -1.08
HMGN1-202ENST00000380747 EXOSC3Q9NQT5 275 aaKnown RBP8.3□□□□□ -1.08
HMGN1-202ENST00000380747 DNAJB12Q9NXW2 375 aaKnown RBP8.3□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF443Q9Y2A4 671 aaPredicted RBP8.3□□□□□ -1.08
HMGN1-202ENST00000380747 DSPPQ9NZW4 1301 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 GTF3C1Q12789 2109 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 VPS13CQ709C8 3753 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 A0A0J9YW62 118 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 GJE1A6NN92 205 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 SLC22A2O15244 555 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 EFNA2O43921 213 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 DNAJA2O60884 412 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 RCBTB2O95199 551 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 PGM3O95394 542 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 SYNGR4O95473 234 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 PABPC4LP0CB38 370 aaKnown RBP8.29□□□□□ -1.08
HMGN1-202ENST00000380747 VSIG8P0DPA2 414 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 ARAFP10398 606 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 UQCRBP14927 111 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 CCNA2P20248 432 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 DRD4P21917 467 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 SLC6A2P23975 617 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 CTSSP25774 331 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 ADH6P28332 368 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 SHC1P29353 583 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 AQP1P29972 269 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 ADSLP30566 484 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-202ENST00000380747 IDH2P48735 452 aaKnown RBP8.29□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF136P52737 540 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 FOXF2Q12947 444 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 SELENBP1Q13228 472 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 CYLC2Q14093 348 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-202ENST00000380747 SCARB2Q14108 478 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 SELPLGQ14242 412 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 CYP51A1Q16850 503 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 CTU2Q2VPK5 515 aaKnown RBP8.29□□□□□ -1.08
HMGN1-202ENST00000380747 TRMT5Q32P41 509 aaKnown RBP8.29□□□□□ -1.08
HMGN1-202ENST00000380747 SLC25A35Q3KQZ1 300 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 TMEM176BQ3YBM2 270 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-202ENST00000380747 SLC25A53Q5H9E4 307 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 PRAMEF8Q5VWM4 474 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 PRAMEF7Q5VXH5 474 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 HBMQ6B0K9 141 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 REEP3Q6NUK4 255 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 ZNF836Q6ZNA1 936 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 ESPNLQ6ZVH7 1005 aa8.29□□□□□ -1.08
HMGN1-202ENST00000380747 PLEKHM3Q6ZWE6 761 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms