RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 HLCSP50747 726 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 GPR85P60893 370 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 B3GLCTQ6Y288 498 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 TIMM29Q9BSF4 260 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 SLC6A5Q9Y345 797 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 hCG_1809904A0A1W2PP81 198 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 A0A1W2PPE2 198 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 A0A1W2PR64 198 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 A0A1W2PS29 197 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 DUSP2Q05923 314 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 RAB33AQ14088 237 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 FAM199XQ6PEV8 388 aaPredicted RBP11.66□□□□□ -0.54
CHD3-203ENST00000380358 SLC22A25Q6T423 547 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 ZNF440Q8IYI8 595 aa11.66□□□□□ -0.54
CHD3-203ENST00000380358 TXNL4BQ9NX01 149 aaKnown RBP11.66□□□□□ -0.54
CHD3-203ENST00000380358 STC2O76061 302 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 HTN1P15515 57 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 TNK1Q13470 666 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 ACSM3Q53FZ2 586 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 NAGSQ8N159 534 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 BMFQ96LC9 184 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 EMC9Q9Y3B6 208 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 BCL9O00512 1426 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 ZNF732B4DXR9 585 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 H0YAE9 185 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 M0R1B8 84 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 P2RX3P56373 397 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 SLC22A10Q63ZE4 541 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 MFSD5Q6N075 450 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 ESPNLQ6ZVH7 1005 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 NT5C3BQ969T7 300 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 NKX6-3A6NJ46 265 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 GABRR3A8MPY1 467 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 HLA-DOBP13765 273 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 DBX2Q6ZNG2 339 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 ZNF767PQ75MW2 155 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 NAA40Q86UY6 237 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 MMP21Q8N119 569 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 VWA5B2Q8N398 1253 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 SIRT6Q8N6T7 355 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 OR10X1Q8NGY0 326 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 RHBDF1Q96CC6 855 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 FEVQ99581 238 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 A0A0B4J2A0 478 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 HSD17B7P56937 341 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 FAM198BQ6UWH4 519 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 OR6F1Q8NGZ6 308 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 GALNT9Q9HCQ5 603 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 SHPKQ9UHJ6 478 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 LIPT1Q9Y234 373 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 HPGDSO60760 199 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 BCKDHBP21953 392 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 IDUAP35475 653 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 ZNF684Q5T5D7 378 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 MAMDC4Q6UXC1 1216 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 TFAP2CQ92754 450 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 ARL11Q969Q4 196 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 MTHFD2LQ9H903 347 aaPredicted RBP11.65□□□□□ -0.54
CHD3-203ENST00000380358 CD300AQ9UGN4 299 aa11.65□□□□□ -0.54
CHD3-203ENST00000380358 KRBOX1C9JBD0 128 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 BCAS2O75934 225 aaPredicted RBP11.65□□□□□ -0.55
CHD3-203ENST00000380358 SLC6A11P48066 632 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 DCAF12L1Q5VU92 463 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 VRK2Q86Y07 508 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 NECAP1Q8NC96 275 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 PAPD5Q8NDF8 572 aaKnown RBP11.65□□□□□ -0.55
CHD3-203ENST00000380358 OR8U1Q8NH10 309 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 DUSP19Q8WTR2 217 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 SPIN2AQ99865 258 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 SPIN2BQ9BPZ2 258 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 NTMT1Q9BV86 223 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 EGLN3Q9H6Z9 239 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 V9GYS6 101 aa11.65□□□□□ -0.55
CHD3-203ENST00000380358 PREX2Q70Z35 1606 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 MSTNO14793 375 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 LYPLA2O95372 231 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 OR8U8P0C7N1 319 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 LAMP1P11279 417 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 TANGO2Q6ICL3 276 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 LPCAT3Q6P1A2 487 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 PODNL1Q6PEZ8 512 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 ERMP1Q7Z2K6 904 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 GAREM1Q9H706 876 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 A0A096LPI6 279 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 PHYHO14832 338 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 TP53P04637 393 aaPredicted RBP11.64□□□□□ -0.55
CHD3-203ENST00000380358 ELLP55199 621 aaPredicted RBP11.64□□□□□ -0.55
CHD3-203ENST00000380358 ACTBP60709 375 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 ACTG1P63261 375 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 PMPCAQ10713 525 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 RTP2Q5QGT7 225 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 COMMD6Q7Z4G1 85 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 LINC00346Q8IVM7 164 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 KDM8Q8N371 416 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 OR10G3Q8NGC4 313 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 TECTBQ96PL2 329 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 A0A0J9YY10 115 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 TRAPPC13A5PLN9 417 aa11.64□□□□□ -0.55
CHD3-203ENST00000380358 SRP14P37108 136 aaKnown RBP11.64□□□□□ -0.55
CHD3-203ENST00000380358 RAB13P51153 203 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms