RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CD200P41217 278 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 WNT4P56705 351 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 OR2B8PP59922 312 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 RPL38P63173 70 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 KLF9Q13886 244 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 SF1Q15637 639 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ZNHIT3Q15649 155 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 C2orf68Q2NKX9 166 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 VMACQ2NL98 169 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 TMEM201Q5SNT2 666 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 FAM69AQ5T7M9 428 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 CEACAM20Q6UY09 585 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 Q6ZNB5 142 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 DNAJB7Q7Z6W7 309 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 GPR137CQ8N3F9 429 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 OR4A4PQ8NGN8 299 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 OR5M1Q8NGP8 315 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 XAGE5Q8WWM1 108 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ACOT12Q8WYK0 555 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 RAB24Q969Q5 203 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF75AQ96N20 296 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 CNTNAP3BQ96NU0 1288 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 SFXN1Q9H9B4 322 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 UQCC1Q9NVA1 299 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 hCG_1809904A0A1W2PP81 198 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 A0A1W2PPC1 479 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 A0A1W2PR64 198 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 A0A1W2PRV1 198 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 A8MWP6 167 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 TMEM229AB2RXF0 380 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 MCIDASD6RGH6 385 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 H7C1Q1 480 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 EMC8O43402 210 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 STC2O76061 302 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 FARS2O95363 451 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 OR4E1P0C645 316 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 GKN3PP0CG01 181 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 C1GALT1C1LP0DN25 315 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 CTSAP10619 480 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 LPOP22079 712 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 FDXRP22570 491 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 HOXD9P28356 352 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 THBS2P35442 1172 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 RPL3P39023 403 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 AKR1C3P42330 323 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 CHRNA4P43681 627 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 OMPP47874 163 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 VEGFBP49765 207 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 CDH12P55289 794 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 SNRPGP62308 76 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 RAP1AP62834 184 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 SLBPQ14493 270 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 RNASE10Q5GAN6 216 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 CRB2Q5IJ48 1285 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 DNLZQ5SXM8 178 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 SLC22A10Q63ZE4 541 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ZNF626Q68DY1 528 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ETFRF1Q6IPR1 90 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 ACSM5Q6NUN0 579 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 OR52B6Q8NGF0 335 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 OR52I1Q8NGK6 324 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 OR10D4PQ8NGN7 298 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 MRPS31Q92665 395 aaKnown RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 LYSMD1Q96S90 227 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 MAPKAP1Q9BPZ7 522 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 NDUFAF3Q9BU61 184 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 PARD6GQ9BYG4 376 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-201ENST00000379989 DPY30Q9C005 99 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 DERL2Q9GZP9 239 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 CLMPQ9H6B4 373 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 TREM1Q9NP99 234 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 SLC35A3Q9Y2D2 325 aa6.95□□□□□ -1.3
CDKL5-201ENST00000379989 A8MXE2 369 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 TLR4O00206 839 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 GABRPO00591 440 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 LDB2O43679 373 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 KCNK5O95279 499 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 HNRNPA1P09651 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 MYOGP15173 224 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 RAB5AP20339 215 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 CERS1P27544 350 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 MAT2AP31153 395 aaKnown RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 HOXC12P31275 282 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 LUMP51884 338 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 CRISP1P54107 249 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 ERVPABLB-1P60509 514 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 RBX1P62877 108 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 HSD11B2P80365 405 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 BCL2L1Q07817 233 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 TRA2AQ13595 282 aaKnown RBP eCLIP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 SIRPB2Q5JXA9 342 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 RAB12Q6IQ22 244 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 OR51S1Q8NGJ8 323 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 IFI44Q8TCB0 444 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 ST7LQ8TDW4 575 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 IGSF8Q969P0 613 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 FOXRED1Q96CU9 486 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 TCTN2Q96GX1 697 aa6.94□□□□□ -1.3
CDKL5-201ENST00000379989 DPH2Q9BQC3 489 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-201ENST00000379989 EPHX3Q9H6B9 360 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms